| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is expG [H]
Identifier: 99081572
GI number: 99081572
Start: 1827197
End: 1827694
Strand: Reverse
Name: expG [H]
Synonym: TM1040_1731
Alternate gene names: 99081572
Gene position: 1827694-1827197 (Counterclockwise)
Preceding gene: 99081573
Following gene: 99081570
Centisome position: 57.1
GC content: 54.42
Gene sequence:
>498_bases ATGAGTATGGAACGACCAATCAGCCAGCTGGACCGCAAGGGGTTCATGACTGGTTATCTTGATGCCCTGGCACTGGTGGA GCGTTTGCACCGCCTGTTGCTTGATGTCATCAAGGATGAGTTTGAACGCGTAGGTGTCCTTGACATCAACGCGGTGCAGG CTCTGTTGCTGTTCAACATTGGCGACAATGAGGTGACTGCCGGGGAACTCAAAACCCGTGGTTACTATCAGGGCAGCAAC GTAAGCTACAATCTGAAGAAGCTGGTGGAGATGGGCTATATGCACCATCAACGCTGCGAGATCGACCGCAGGTCGGTGCG TGTGCGTCTTACTCCCCGTGGCCGTGAAATTCGCGATATCGTTGCCTCGCTGTTTTCGCGTCACGCAGAGGGTCTGGAAA CCAAAGGCGTGATCAGCGCCGAAGGGATCGAGGACATCACTGGCTCCCTCAAACGCATGGAGCGGTACTGGTCCGACCAG ATTCGCTACATCTATTAA
Upstream 100 bases:
>100_bases TCTAGAACATACCAAAAATAAAAGAGAAATCCGGTTTAACGCATTTTCAGGAAATTCCCTCCATATTTGTCATGAAGCAA TTTCGATTCGGAGATGCTGA
Downstream 100 bases:
>100_bases GAACCGTTTTTCGGGCCTTTAGGTTCGTGGGACATTTAAGACAGCAGTTTTCAGGCTCCAGATTCTGACGTTCGGCATCG CCGTACCGCGCATCTGGCCT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSMERPISQLDRKGFMTGYLDALALVERLHRLLLDVIKDEFERVGVLDINAVQALLLFNIGDNEVTAGELKTRGYYQGSN VSYNLKKLVEMGYMHHQRCEIDRRSVRVRLTPRGREIRDIVASLFSRHAEGLETKGVISAEGIEDITGSLKRMERYWSDQ IRYIY
Sequences:
>Translated_165_residues MSMERPISQLDRKGFMTGYLDALALVERLHRLLLDVIKDEFERVGVLDINAVQALLLFNIGDNEVTAGELKTRGYYQGSN VSYNLKKLVEMGYMHHQRCEIDRRSVRVRLTPRGREIRDIVASLFSRHAEGLETKGVISAEGIEDITGSLKRMERYWSDQ IRYIY >Mature_164_residues SMERPISQLDRKGFMTGYLDALALVERLHRLLLDVIKDEFERVGVLDINAVQALLLFNIGDNEVTAGELKTRGYYQGSNV SYNLKKLVEMGYMHHQRCEIDRRSVRVRLTPRGREIRDIVASLFSRHAEGLETKGVISAEGIEDITGSLKRMERYWSDQI RYIY
Specific function: Transcriptional activator of genes for galactoglucan synthesis (exopolysaccharide II or EPS II) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19095; Mature: 18964
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMERPISQLDRKGFMTGYLDALALVERLHRLLLDVIKDEFERVGVLDINAVQALLLFNI CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GDNEVTAGELKTRGYYQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVRLTPRGREIRDI CCCCEEHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH VASLFSRHAEGLETKGVISAEGIEDITGSLKRMERYWSDQIRYIY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure SMERPISQLDRKGFMTGYLDALALVERLHRLLLDVIKDEFERVGVLDINAVQALLLFNI CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GDNEVTAGELKTRGYYQGSNVSYNLKKLVEMGYMHHQRCEIDRRSVRVRLTPRGREIRDI CCCCEEHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH VASLFSRHAEGLETKGVISAEGIEDITGSLKRMERYWSDQIRYIY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672816; 9023225; 9501442; 11481431 [H]