| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081521
Identifier: 99081521
GI number: 99081521
Start: 1777863
End: 1778165
Strand: Reverse
Name: 99081521
Synonym: TM1040_1680
Alternate gene names: NA
Gene position: 1778165-1777863 (Counterclockwise)
Preceding gene: 99081522
Following gene: 99081520
Centisome position: 55.55
GC content: 63.7
Gene sequence:
>303_bases ATGCTGGATGACCCTCTCACGGCCATTTACGCCAAGGTACAAGCGCAGCAGGAAGCCGAGGCGCGCAAGATTGCAGCAAT CGCCGCGCACATCGGCCACAACGGCGGTCCGAGGATCGAAGCACCCTTCGGTATTGACGCCCCGTGGCTGCGCTATGCGG ACGACGCGGAACTCTCGCGCCTCGCCACCCTTGAGCCACGCATCGAGCGCAAGAAGCTGATCCTCGCGGAGACTATCGCT GAGCGCACACGGATCATGAACCGCTGCATCCGCCGGATGCGCAGAGCCGCGGGTAAGGACTGA
Upstream 100 bases:
>100_bases CACGCAGAACATCCGATCTGGTCTTTCCATGGCGATTGGACGGGCGATTTCTCCGAAGCCTGTACAGCGCAACCCACTGT ACAAGACGGAGGATTGATCA
Downstream 100 bases:
>100_bases TGGCAGCATTCTCAAATTTCGCTGACATGCCGCTGTTCCGCTATGGCCTGATCATGGCAGATCCGCCGTGGTCTTATGAG AATTGGTCGGCAAAAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MLDDPLTAIYAKVQAQQEAEARKIAAIAAHIGHNGGPRIEAPFGIDAPWLRYADDAELSRLATLEPRIERKKLILAETIA ERTRIMNRCIRRMRRAAGKD
Sequences:
>Translated_100_residues MLDDPLTAIYAKVQAQQEAEARKIAAIAAHIGHNGGPRIEAPFGIDAPWLRYADDAELSRLATLEPRIERKKLILAETIA ERTRIMNRCIRRMRRAAGKD >Mature_100_residues MLDDPLTAIYAKVQAQQEAEARKIAAIAAHIGHNGGPRIEAPFGIDAPWLRYADDAELSRLATLEPRIERKKLILAETIA ERTRIMNRCIRRMRRAAGKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11247; Mature: 11247
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDPLTAIYAKVQAQQEAEARKIAAIAAHIGHNGGPRIEAPFGIDAPWLRYADDAELSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHH LATLEPRIERKKLILAETIAERTRIMNRCIRRMRRAAGKD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDDPLTAIYAKVQAQQEAEARKIAAIAAHIGHNGGPRIEAPFGIDAPWLRYADDAELSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHH LATLEPRIERKKLILAETIAERTRIMNRCIRRMRRAAGKD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA