| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081506
Identifier: 99081506
GI number: 99081506
Start: 1766168
End: 1766623
Strand: Reverse
Name: 99081506
Synonym: TM1040_1665
Alternate gene names: NA
Gene position: 1766623-1766168 (Counterclockwise)
Preceding gene: 99081507
Following gene: 99081505
Centisome position: 55.19
GC content: 59.65
Gene sequence:
>456_bases ATGAAGGCGTCATTCAAGGTCGAGGGGCTTCGAGAGATCGACAATGCACTGGCGGCGCTGCCCAAGGCCACCTCCAAGGC GGTTGTGCGCCGCGCGCTGTCGAAGGAGCTGCAGCCGGTCGCAGATATGGCGAACGGGCTATGGCCTGGCGCCGACGACA GTGCATTCGCTGTTTCCTCCAAGCTCAAGAGAAACCTGCAAAAAGCCAAAAGCAGCACCACTGCGGTGACTATGTATGTT GGCGCAACTCCTTCCGCACCTCACTCGCATCTACTGGAATTTGGCACAGAGCCTCGCTTTCACGAAAGCGGAAAGTACGT TGGTGCGGTCTCGCCTCGACCGATGTTGACACCTTCCTGGGATGCATTCCGTGGGCAGATCCTAGAGGGACTGGCCGCGT CCTTGCGAGAAGAGATCGAGGCGACCCTGGCGCGCCGCGCAAAGCGAGGCTTCTAA
Upstream 100 bases:
>100_bases TGCGGGATATCGGTAAGGGCACTGTTTACAACATCCGCGCGGTGGAGCCGAACCGGGAAAAGCCGCGCCAGTATCTAGAT TTCATCTGCGAGAGTGGCAC
Downstream 100 bases:
>100_bases TGGAAGAGCACCTGTATTCAACTCTCTCCGACGCCCTGAGTTGCCCGGTGAAGTGGGGCTTCTTCAGCGATGGGGAGACC ATGCCACGCGTGACCATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF
Sequences:
>Translated_151_residues MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF >Mature_151_residues MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16294; Mature: 16294
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSS CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KLKRNLQKAKSSTTAVTMYVGATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSW HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCH DAFRGQILEGLAASLREEIEATLARRAKRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSS CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KLKRNLQKAKSSTTAVTMYVGATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSW HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCH DAFRGQILEGLAASLREEIEATLARRAKRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA