| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081501
Identifier: 99081501
GI number: 99081501
Start: 1763994
End: 1764332
Strand: Reverse
Name: 99081501
Synonym: TM1040_1660
Alternate gene names: NA
Gene position: 1764332-1763994 (Counterclockwise)
Preceding gene: 99081502
Following gene: 99081500
Centisome position: 55.12
GC content: 60.47
Gene sequence:
>339_bases TTGCCTGATATATCCGGGGTCGAATACCTTCTGGACATGATGGCGCAGGAGGGCCTTGGCTGGTGCTCCTTCGATCAGAT GGGTGGTGCTGAGCCGGTCGCTTGGTCCGAGATCCGGGCCTTCTCGAAAGAGTCGGGCCTTAATCTTGAGCCGTGGGAGG CCAAGCAGGTCCGCGCGATGAGCGTGTCATATGTCGCCGGTATGGCGCGAGGCCAGAGGCCTATGCAGGTTTCTCCAGCC TATGACGACAGGCCGGATAACGATCCTGGCGTTGCGATGGAGCGCAAGAAGCTTTCGGACAAAGTGGGCGCGGCTCTGTC TGCAATGGCGGGGTCGTGA
Upstream 100 bases:
>100_bases GACGCTCTATGCAGCCCAGGCCGGTTTCCTTGCAGCAAGGCCTGAAGAATGGAAAACCAGCCGCTTCAAGCTCTGGCAGA GAGAGGGCATCGACTTCGCA
Downstream 100 bases:
>100_bases CTCGACATGTGAGTGTCACGTCCCTAAAGTTCTGCTTTCCAGGAGCCGATTTTACGAGGCCGGGCCATGCAAAAAGCTAA GGAAAAGCCAGAAACAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPA YDDRPDNDPGVAMERKKLSDKVGAALSAMAGS
Sequences:
>Translated_112_residues MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPA YDDRPDNDPGVAMERKKLSDKVGAALSAMAGS >Mature_111_residues PDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPAY DDRPDNDPGVAMERKKLSDKVGAALSAMAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12117; Mature: 11986
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH SVSYVAGMARGQRPMQVSPAYDDRPDNDPGVAMERKKLSDKVGAALSAMAGS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH SVSYVAGMARGQRPMQVSPAYDDRPDNDPGVAMERKKLSDKVGAALSAMAGS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA