| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081442
Identifier: 99081442
GI number: 99081442
Start: 1712755
End: 1713351
Strand: Reverse
Name: 99081442
Synonym: TM1040_1601
Alternate gene names: NA
Gene position: 1713351-1712755 (Counterclockwise)
Preceding gene: 99081443
Following gene: 99081440
Centisome position: 53.53
GC content: 47.4
Gene sequence:
>597_bases GTGGATTTTTTTACGCGTATCTCTGATGTTGTTTCCTGCGTGCTGCGCCCAGTTTCAGATCAGAGTGAAAATCACTTTTT TGAGTTTTCATGGTTGAAGAAGCTAGGCGCAACGGATGTCGCCACGGCCATTGCAACCGTAGTAATTGCTGTATTTACGG TTGCGATGTTTAGGCTTCATAAAGAGCAACAAAAGCACGATAGAGCCGTAGCCAGAGCGAACTACCAATTTTCTCTTTTT GAAAAGAGGCTTGAGGTCTATTTTGAAGTTCAACGTTTTTTCTATTCGGCGTTTGAGCACCGTGTTCCACAAATGGAAAG TATAGGCGCGCTTCACAAGTCATCCGCTACCGGAACCTTCATTTTTGGTGAGAAAGTCAAGGCGTTCCTTTCTGATTGTG TCAACAAAGCTATGCGACACCATCAATTGGAAACGCGGCGCACGCGCAATGCCGGGATCGACGAGGAAATAGTACAGAGG TGCATGGTTGAACAAGCCGAAATCGAAGATTGGTTGTCTGGAAAGGGTGCTCCTGCCTCGCTCGAGCAGATGTTTTCTGA GTATCTGGAGCTCCCCGCCGACCTCCCAAGGGAGTAA
Upstream 100 bases:
>100_bases TGTTTGGATTTTGGGTCAATAGTTCAACTGTTGAGAATGAACCGACAAGCACTAATGAGACTAAGTCGATTAAATCGAAA TAGGAGGTTGAGAACATCAA
Downstream 100 bases:
>100_bases AGACTGAGTCAAACTCAGTGCTCGTGCTATTTGGAGGCGTTGATCTTGCGGCTTTTATGTTCTACATACGTTCTCTCTCG CGGAGAGCGTAATCCATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDFFTRISDVVSCVLRPVSDQSENHFFEFSWLKKLGATDVATAIATVVIAVFTVAMFRLHKEQQKHDRAVARANYQFSLF EKRLEVYFEVQRFFYSAFEHRVPQMESIGALHKSSATGTFIFGEKVKAFLSDCVNKAMRHHQLETRRTRNAGIDEEIVQR CMVEQAEIEDWLSGKGAPASLEQMFSEYLELPADLPRE
Sequences:
>Translated_198_residues MDFFTRISDVVSCVLRPVSDQSENHFFEFSWLKKLGATDVATAIATVVIAVFTVAMFRLHKEQQKHDRAVARANYQFSLF EKRLEVYFEVQRFFYSAFEHRVPQMESIGALHKSSATGTFIFGEKVKAFLSDCVNKAMRHHQLETRRTRNAGIDEEIVQR CMVEQAEIEDWLSGKGAPASLEQMFSEYLELPADLPRE >Mature_198_residues MDFFTRISDVVSCVLRPVSDQSENHFFEFSWLKKLGATDVATAIATVVIAVFTVAMFRLHKEQQKHDRAVARANYQFSLF EKRLEVYFEVQRFFYSAFEHRVPQMESIGALHKSSATGTFIFGEKVKAFLSDCVNKAMRHHQLETRRTRNAGIDEEIVQR CMVEQAEIEDWLSGKGAPASLEQMFSEYLELPADLPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22836; Mature: 22836
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFTRISDVVSCVLRPVSDQSENHFFEFSWLKKLGATDVATAIATVVIAVFTVAMFRLH CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KEQQKHDRAVARANYQFSLFEKRLEVYFEVQRFFYSAFEHRVPQMESIGALHKSSATGTF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH IFGEKVKAFLSDCVNKAMRHHQLETRRTRNAGIDEEIVQRCMVEQAEIEDWLSGKGAPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LEQMFSEYLELPADLPRE HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDFFTRISDVVSCVLRPVSDQSENHFFEFSWLKKLGATDVATAIATVVIAVFTVAMFRLH CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KEQQKHDRAVARANYQFSLFEKRLEVYFEVQRFFYSAFEHRVPQMESIGALHKSSATGTF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH IFGEKVKAFLSDCVNKAMRHHQLETRRTRNAGIDEEIVQRCMVEQAEIEDWLSGKGAPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LEQMFSEYLELPADLPRE HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA