| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ppnK [H]
Identifier: 99081419
GI number: 99081419
Start: 1688007
End: 1688762
Strand: Reverse
Name: ppnK [H]
Synonym: TM1040_1578
Alternate gene names: 99081419
Gene position: 1688762-1688007 (Counterclockwise)
Preceding gene: 99081422
Following gene: 99081417
Centisome position: 52.76
GC content: 61.64
Gene sequence:
>756_bases ATGAGAATCGCATTTCTGGCCAGCGAGGCCCCTTTGGCGCAGACGGCTCTTTCTGTTCTGAGCAAACGCTACGGATCTGT CGCCGTCGAGGCCGCAGATGTTATCGTGGCGCTGGGGGGCGATGGGTTCATGTTGCACACGCTGCGTGACACCGTTGATC TCAATATTCCGATCTACGGGATGAACCGCGGCACGGTTGGTTTCTTGATGAACAGCTTTGGCGAGGACGCGCTTCTGGAA CGGCTGGAGGCCGCCAATGAAGAGATCATCCACCCCTTGCGGATGCGGGCGCAGGACCGGGCCGGGGTCATGCATGAGGC GATGGCGATCAACGAAGTGTCCTTGCTGCGGCAGGGTCCGCAGGCGGCCAAGCTCAAGATCTCGGTTGATGGGCGGCAGC GGATGGCGGAGCTGGTTTGCGATGGCGCGCTGGTGTCGACGCCTGCGGGCTCCACCGCCTATAATTTTTCGGCGCACGGC CCGATCCTGCCCATCGGGGCGGATGTGCTGGCGCTGACGGCGATTGCGGCCTTTCGCCCAAGGCGCTGGCGCGGCGCGTT GCTGCCCAGTGGGGCCACCGTGCGTTTTGACGTGATCGATGCGGCCAAGCGACCCGTGATGGCGGAAGCGGATTCGATTT CCTTCAAGGAGATCGACTGGGTTGAAATCCAGAGTGAACGCCGGATCAGCCACAAGATCCTGTTTGACCCCGGTCATGGG CTTGAGGAACGGCTGATCTCGGAACAGTTCAACTGA
Upstream 100 bases:
>100_bases GCGACGAAACGCATCAGGTGAACGGCAACTCTGGTCAACGGGGAAAACCTGTGCTTGTTTCGGAACCGTTTGGACCCTAC CGGAAACAGGATCGCGCCTT
Downstream 100 bases:
>100_bases GGCCGCGCTGGCGCGCGACAGGTTGAGCCTTGGACCCATGGGTCCAAGGCCGTGCCTCCGGCGGGGATATTTCTGGTTAG AAGAAGGCATCGGCGCGCAC
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MRIAFLASEAPLAQTALSVLSKRYGSVAVEAADVIVALGGDGFMLHTLRDTVDLNIPIYGMNRGTVGFLMNSFGEDALLE RLEAANEEIIHPLRMRAQDRAGVMHEAMAINEVSLLRQGPQAAKLKISVDGRQRMAELVCDGALVSTPAGSTAYNFSAHG PILPIGADVLALTAIAAFRPRRWRGALLPSGATVRFDVIDAAKRPVMAEADSISFKEIDWVEIQSERRISHKILFDPGHG LEERLISEQFN
Sequences:
>Translated_251_residues MRIAFLASEAPLAQTALSVLSKRYGSVAVEAADVIVALGGDGFMLHTLRDTVDLNIPIYGMNRGTVGFLMNSFGEDALLE RLEAANEEIIHPLRMRAQDRAGVMHEAMAINEVSLLRQGPQAAKLKISVDGRQRMAELVCDGALVSTPAGSTAYNFSAHG PILPIGADVLALTAIAAFRPRRWRGALLPSGATVRFDVIDAAKRPVMAEADSISFKEIDWVEIQSERRISHKILFDPGHG LEERLISEQFN >Mature_251_residues MRIAFLASEAPLAQTALSVLSKRYGSVAVEAADVIVALGGDGFMLHTLRDTVDLNIPIYGMNRGTVGFLMNSFGEDALLE RLEAANEEIIHPLRMRAQDRAGVMHEAMAINEVSLLRQGPQAAKLKISVDGRQRMAELVCDGALVSTPAGSTAYNFSAHG PILPIGADVLALTAIAAFRPRRWRGALLPSGATVRFDVIDAAKRPVMAEADSISFKEIDWVEIQSERRISHKILFDPGHG LEERLISEQFN
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788968, Length=175, Percent_Identity=32.5714285714286, Blast_Score=64, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6325068, Length=177, Percent_Identity=27.683615819209, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 27289; Mature: 27289
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAFLASEAPLAQTALSVLSKRYGSVAVEAADVIVALGGDGFMLHTLRDTVDLNIPIYG CEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEECCCEEECEEEEE MNRGTVGFLMNSFGEDALLERLEAANEEIIHPLRMRAQDRAGVMHEAMAINEVSLLRQGP CCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCC QAAKLKISVDGRQRMAELVCDGALVSTPAGSTAYNFSAHGPILPIGADVLALTAIAAFRP CCEEEEEEECHHHHHHHHHHCCCEEECCCCCCEEECCCCCCEEECCHHHHHHHHHHHHCC RRWRGALLPSGATVRFDVIDAAKRPVMAEADSISFKEIDWVEIQSERRISHKILFDPGHG CCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCC LEERLISEQFN HHHHHHHHCCC >Mature Secondary Structure MRIAFLASEAPLAQTALSVLSKRYGSVAVEAADVIVALGGDGFMLHTLRDTVDLNIPIYG CEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEECCCEEECEEEEE MNRGTVGFLMNSFGEDALLERLEAANEEIIHPLRMRAQDRAGVMHEAMAINEVSLLRQGP CCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCC QAAKLKISVDGRQRMAELVCDGALVSTPAGSTAYNFSAHGPILPIGADVLALTAIAAFRP CCEEEEEEECHHHHHHHHHHCCCEEECCCCCCEEECCCCCCEEECCHHHHHHHHHHHHCC RRWRGALLPSGATVRFDVIDAAKRPVMAEADSISFKEIDWVEIQSERRISHKILFDPGHG CCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCC LEERLISEQFN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA