| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is zntR [C]
Identifier: 99081395
GI number: 99081395
Start: 1660504
End: 1660872
Strand: Direct
Name: zntR [C]
Synonym: TM1040_1554
Alternate gene names: 99081395
Gene position: 1660504-1660872 (Clockwise)
Preceding gene: 99081391
Following gene: 99081396
Centisome position: 51.88
GC content: 57.45
Gene sequence:
>369_bases ATGACCGAAACAAAACTGTCATTCAAGGAGATGTGCGCCGAGTTCGATGTGACACCGCGCACCCTTCGGTACTATGAATA TATCGAGCTGTTGCAGCCCGAACGTCAGGGCCGCTCGCGGTTCTACGGCGCGCGCGACGTGGCGCGGATGAAGCTGATCC TGCGCGGGCGCAAGTTCGGCTTTCAGCTCGAAGAGATCCGGCAATGGTTGCTGATCTACGACAAGGAAGGCGACGAAGCG CAAAACCGCGCCTTTATCGAGATGGCCGACCGGCAACTCAAGGAGCTGGAACTCCAGCGCCAGCAGATCAACGAGGCGAT GGACGAACTCACTGATCTGCGCAAGGTGACGCTCGGTTTATTGAAGTAG
Upstream 100 bases:
>100_bases CATTTATTCCGCGCATGGGGGCAAAGCGCAAGGCTCGCGAAACTCCCAGTTGCACCGGTTGGTTCAGTTGCTTAGGTTGC CCGAGCAAGGGAGGACATGG
Downstream 100 bases:
>100_bases GTCACTCGCCCGTTGCACCCACCGAGAGTAGCTGCGCAAGGCACAACAATGGACATACACGACTGTATCGGCGAGACCTC TTTCTACCCGCAGCTGCTTT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Transcriptional Regulator Merr Family; Regulatory Protein MerR; Regulatory Gene Of GnyRDBHAL Cluster GnyR; MerR Family Regulatory Family; Mercuric Resistance Operon Regulatory Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTETKLSFKEMCAEFDVTPRTLRYYEYIELLQPERQGRSRFYGARDVARMKLILRGRKFGFQLEEIRQWLLIYDKEGDEA QNRAFIEMADRQLKELELQRQQINEAMDELTDLRKVTLGLLK
Sequences:
>Translated_122_residues MTETKLSFKEMCAEFDVTPRTLRYYEYIELLQPERQGRSRFYGARDVARMKLILRGRKFGFQLEEIRQWLLIYDKEGDEA QNRAFIEMADRQLKELELQRQQINEAMDELTDLRKVTLGLLK >Mature_121_residues TETKLSFKEMCAEFDVTPRTLRYYEYIELLQPERQGRSRFYGARDVARMKLILRGRKFGFQLEEIRQWLLIYDKEGDEAQ NRAFIEMADRQLKELELQRQQINEAMDELTDLRKVTLGLLK
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14713; Mature: 14582
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETKLSFKEMCAEFDVTPRTLRYYEYIELLQPERQGRSRFYGARDVARMKLILRGRKFG CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC FQLEEIRQWLLIYDKEGDEAQNRAFIEMADRQLKELELQRQQINEAMDELTDLRKVTLGL CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LK CC >Mature Secondary Structure TETKLSFKEMCAEFDVTPRTLRYYEYIELLQPERQGRSRFYGARDVARMKLILRGRKFG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC FQLEEIRQWLLIYDKEGDEAQNRAFIEMADRQLKELELQRQQINEAMDELTDLRKVTLGL CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA