Click here to switch to the map view.

The map label for this gene is marR [C]

Identifier: 99081387

GI number: 99081387

Start: 1653637

End: 1654122

Strand: Direct

Name: marR [C]

Synonym: TM1040_1546

Alternate gene names: 99081387

Gene position: 1653637-1654122 (Clockwise)

Preceding gene: 99081385

Following gene: 99081390

Centisome position: 51.66

GC content: 61.32

Gene sequence:

>486_bases
ATGCAACGGACGACGCCCATGTCAGACCTGGAACTGGAGATAGACACCCAACCCGCGACATTGATCCGCCGTCTCAACCA
GATTGCGGTGGCACGGTTCACCTCGACGATGAGCGCGGCGCAGCTGGACCTGACCCCGGTGCAGTATGCGGCCCTTTCGG
CGCTCGAGGCGCATCCGGGTGTGGACCAGGCCACGCTTGCCACACATGTCGGCTATGATCGCGCAACGCTTGGCAAAGTG
GTGGAGCGGCTGGAAGCCAAAACACTTCTGATCCGCGAGGTAGACCCCAGAGACCGGCGCGCACGTTGTTTGCGCATCAC
CCAGAACGGAGCGCAGCTCTTGTCAAAGGTGCACCCTTTGGTAGAGGCTCTGCAGCCGCGCATATTGGACGGGCTCACTG
CCGCCGAGCGCAAGGAACTGATCCGCCTGTTAGAAAAAGCAACGCGCGCTCAGTTCAGCGTCTCACGAGAGACAGAACAG
GCCTAG

Upstream 100 bases:

>100_bases
GAAAATCGGAAAGAGTTTGAAACATGAGAGCCATGCCCCATCTCATAGGGGCAGAGGGCGGACAACAAAATACGAAACAT
GGAGACTCCGCCCAGAAATC

Downstream 100 bases:

>100_bases
CTGCGCCCGACTGTGCAGGCGACCAGTGCCGATTAGCCTCGTTTGCGCGCCAGCTCCAGCCGCGCTTCGGTCATCGACAG
ATCCGCAATGATTTGGCGCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQRTTPMSDLELEIDTQPATLIRRLNQIAVARFTSTMSAAQLDLTPVQYAALSALEAHPGVDQATLATHVGYDRATLGKV
VERLEAKTLLIREVDPRDRRARCLRITQNGAQLLSKVHPLVEALQPRILDGLTAAERKELIRLLEKATRAQFSVSRETEQ
A

Sequences:

>Translated_161_residues
MQRTTPMSDLELEIDTQPATLIRRLNQIAVARFTSTMSAAQLDLTPVQYAALSALEAHPGVDQATLATHVGYDRATLGKV
VERLEAKTLLIREVDPRDRRARCLRITQNGAQLLSKVHPLVEALQPRILDGLTAAERKELIRLLEKATRAQFSVSRETEQ
A
>Mature_161_residues
MQRTTPMSDLELEIDTQPATLIRRLNQIAVARFTSTMSAAQLDLTPVQYAALSALEAHPGVDQATLATHVGYDRATLGKV
VERLEAKTLLIREVDPRDRRARCLRITQNGAQLLSKVHPLVEALQPRILDGLTAAERKELIRLLEKATRAQFSVSRETEQ
A

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17921; Mature: 17921

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTTPMSDLELEIDTQPATLIRRLNQIAVARFTSTMSAAQLDLTPVQYAALSALEAHPG
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VDQATLATHVGYDRATLGKVVERLEAKTLLIREVDPRDRRARCLRITQNGAQLLSKVHPL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VEALQPRILDGLTAAERKELIRLLEKATRAQFSVSRETEQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCC
>Mature Secondary Structure
MQRTTPMSDLELEIDTQPATLIRRLNQIAVARFTSTMSAAQLDLTPVQYAALSALEAHPG
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VDQATLATHVGYDRATLGKVVERLEAKTLLIREVDPRDRRARCLRITQNGAQLLSKVHPL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VEALQPRILDGLTAAERKELIRLLEKATRAQFSVSRETEQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]