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The map label for this gene is phaF [H]

Identifier: 99081383

GI number: 99081383

Start: 1649633

End: 1649902

Strand: Direct

Name: phaF [H]

Synonym: TM1040_1542

Alternate gene names: 99081383

Gene position: 1649633-1649902 (Clockwise)

Preceding gene: 99081382

Following gene: 99081384

Centisome position: 51.54

GC content: 54.44

Gene sequence:

>270_bases
ATGATCGAATATGCCTATATCTTCGCCTTCGGCTGTTTCGCCCTGGCGATGCTGATGAACCTCTGGAAAGTCGTGACAGG
CACAGAGGTGACCGACCGGATCCTCGCGCTTGATACCATGTTCATCAACTCCATCGCCCTTGTGGTTCTCTTTGGGGTGT
TCCTCAGTTCCGAGATCTTCTTTGAGGCCTCGCTGATCATGGCGATGCTCGGGTTCATCTCTACCGTGGCCTATGCGCGC
TTCTTGCTGCGCGGCAACATCATCGAGTGA

Upstream 100 bases:

>100_bases
GGCGCTATCTTCTGGTGCATTGCCTGCACGCGCCCAACCCGGATGAGGTGCGCGACGAGATCAAGACCCGCTACGAACGC
CGCCTGAAGGAGATTTTCGA

Downstream 100 bases:

>100_bases
GGAGAAAGACATGATTGCTGAAATTCTCATCACCGCATTCATCGCCCTCGGCGGGATCTTTGGTTTTGTGGGCTCCTTTG
GCCTGCTCAAGCTCAATGAT

Product: putative monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEYAYIFAFGCFALAMLMNLWKVVTGTEVTDRILALDTMFINSIALVVLFGVFLSSEIFFEASLIMAMLGFISTVAYAR
FLLRGNIIE

Sequences:

>Translated_89_residues
MIEYAYIFAFGCFALAMLMNLWKVVTGTEVTDRILALDTMFINSIALVVLFGVFLSSEIFFEASLIMAMLGFISTVAYAR
FLLRGNIIE
>Mature_89_residues
MIEYAYIFAFGCFALAMLMNLWKVVTGTEVTDRILALDTMFINSIALVVLFGVFLSSEIFFEASLIMAMLGFISTVAYAR
FLLRGNIIE

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 9991; Mature: 9991

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYAYIFAFGCFALAMLMNLWKVVTGTEVTDRILALDTMFINSIALVVLFGVFLSSEIF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEASLIMAMLGFISTVAYARFLLRGNIIE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEYAYIFAFGCFALAMLMNLWKVVTGTEVTDRILALDTMFINSIALVVLFGVFLSSEIF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEASLIMAMLGFISTVAYARFLLRGNIIE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]