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The map label for this gene is glxA [H]

Identifier: 99081369

GI number: 99081369

Start: 1631689

End: 1632696

Strand: Direct

Name: glxA [H]

Synonym: TM1040_1528

Alternate gene names: 99081369

Gene position: 1631689-1632696 (Clockwise)

Preceding gene: 99081360

Following gene: 99081370

Centisome position: 50.98

GC content: 58.93

Gene sequence:

>1008_bases
ATGTCTGACGATAGTTTTGTTCAAAAAGGCGCCGCCGCAACACTCAAGGTGCCGCATGCAGGCGCGCCGCAGGACTTCTA
TTTCCTGCTGCTGCCAAAGGCCACGATGCTGCCTGTCGCCGCCGCGATCGAGCCGCTCAGAATTGCAAATCAGGTCACAA
ATACAAAGCTTTATCGCTGGTATATCATGACACAGGATGGCGCGCCGCTACGCTGCTCCAACGGGATGGTTGTCACCCCC
GATCTGCCGCTGGCCCCGCTGCCCTCGGATGCCATGGGCTTTGTGTGTTCAGGCGTGGAGCCCCAGGAGGCCGCCGGTGA
CATCACTCTGAACTGGCTGCGGCGCGAACATCGCTTCGGGCGCAAGCTCGGGGGGATCTGTACCGGTGCATTTGCGCTGG
CGCAGGCGGGGCTGATCAAGGATCAACCCTTCACGCTGCACTGGGAAAACCAACCCGGTTTTGTCGAGCGATACGAGCAC
CTGAAACCCTCGCCTAACATTTACGAGATTTCTGGAAATTTGATGACCTGTGGCGGCGGCAGCGCGGCAACGGACATGAT
GCTGACCCTGATCGAGCAGCGCCATGGCAAGCAGCTGGCGATCATCGTCGCGGATATGTGCCTGCATGTGCGCTCCACCT
CCGGGGCTGCACCTCAGAAATCCAACTATGCCGTCGCCATCGGCAGTCGCAACCAGCGCCTTCTGAGTGCTCTGCAACTG
ATGCAGGAATCGATCGAAGAGCCGCTCTCTATCGGAACACTTTGCGCGCGGCTGGATATTTCCCGTCGCCAATTGGAGCG
CCTGTTCTCGCGCTATCTCGATCAAAGCCCGATGCACGTCTATTCCGACATGCGCCTGAGCCATGCCTTCGCCTTGATGA
ATGAAACCTCGATGTCGGTGACAGAGATTGCGCTTGCCTCCGGGTTCAACTCCGCCACGCATTTCTCTCGGCAATTCAAA
CGCAAATTCGGCGCCAGCCCGCATTTCTTCCGCAAGGGCTGGGCCTGA

Upstream 100 bases:

>100_bases
TCGGATTATCCCGGCACCCCACGTCCGCACGGCGCTAGCTGGTAAATGTGGCAGAGGCATCTCTTTGCACGCAGCCTGTT
TCCTGTGATGGACCCTGAAG

Downstream 100 bases:

>100_bases
CCGCACCCGGCGAAATGAGGGATCACCACGTCCGTGTCTGACGCGGTACGCACTTAAATGTGACGAGTATTTCAGCCCGT
TCGCGCGTAGACCTTGGTGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSDDSFVQKGAAATLKVPHAGAPQDFYFLLLPKATMLPVAAAIEPLRIANQVTNTKLYRWYIMTQDGAPLRCSNGMVVTP
DLPLAPLPSDAMGFVCSGVEPQEAAGDITLNWLRREHRFGRKLGGICTGAFALAQAGLIKDQPFTLHWENQPGFVERYEH
LKPSPNIYEISGNLMTCGGGSAATDMMLTLIEQRHGKQLAIIVADMCLHVRSTSGAAPQKSNYAVAIGSRNQRLLSALQL
MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSVTEIALASGFNSATHFSRQFK
RKFGASPHFFRKGWA

Sequences:

>Translated_335_residues
MSDDSFVQKGAAATLKVPHAGAPQDFYFLLLPKATMLPVAAAIEPLRIANQVTNTKLYRWYIMTQDGAPLRCSNGMVVTP
DLPLAPLPSDAMGFVCSGVEPQEAAGDITLNWLRREHRFGRKLGGICTGAFALAQAGLIKDQPFTLHWENQPGFVERYEH
LKPSPNIYEISGNLMTCGGGSAATDMMLTLIEQRHGKQLAIIVADMCLHVRSTSGAAPQKSNYAVAIGSRNQRLLSALQL
MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSVTEIALASGFNSATHFSRQFK
RKFGASPHFFRKGWA
>Mature_334_residues
SDDSFVQKGAAATLKVPHAGAPQDFYFLLLPKATMLPVAAAIEPLRIANQVTNTKLYRWYIMTQDGAPLRCSNGMVVTPD
LPLAPLPSDAMGFVCSGVEPQEAAGDITLNWLRREHRFGRKLGGICTGAFALAQAGLIKDQPFTLHWENQPGFVERYEHL
KPSPNIYEISGNLMTCGGGSAATDMMLTLIEQRHGKQLAIIVADMCLHVRSTSGAAPQKSNYAVAIGSRNQRLLSALQLM
QESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSVTEIALASGFNSATHFSRQFKR
KFGASPHFFRKGWA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510985, Length=87, Percent_Identity=35.632183908046, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36963; Mature: 36832

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDSFVQKGAAATLKVPHAGAPQDFYFLLLPKATMLPVAAAIEPLRIANQVTNTKLYRW
CCCHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEE
YIMTQDGAPLRCSNGMVVTPDLPLAPLPSDAMGFVCSGVEPQEAAGDITLNWLRREHRFG
EEEECCCCCEEECCCEEECCCCCCCCCCCHHHHHEECCCCHHHHCCCCHHHHHHHHHHHH
RKLGGICTGAFALAQAGLIKDQPFTLHWENQPGFVERYEHLKPSPNIYEISGNLMTCGGG
HHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCEEEECCC
SAATDMMLTLIEQRHGKQLAIIVADMCLHVRSTSGAAPQKSNYAVAIGSRNQRLLSALQL
CHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSV
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH
TEIALASGFNSATHFSRQFKRKFGASPHFFRKGWA
HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure 
SDDSFVQKGAAATLKVPHAGAPQDFYFLLLPKATMLPVAAAIEPLRIANQVTNTKLYRW
CCHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEE
YIMTQDGAPLRCSNGMVVTPDLPLAPLPSDAMGFVCSGVEPQEAAGDITLNWLRREHRFG
EEEECCCCCEEECCCEEECCCCCCCCCCCHHHHHEECCCCHHHHCCCCHHHHHHHHHHHH
RKLGGICTGAFALAQAGLIKDQPFTLHWENQPGFVERYEHLKPSPNIYEISGNLMTCGGG
HHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCEEEECCC
SAATDMMLTLIEQRHGKQLAIIVADMCLHVRSTSGAAPQKSNYAVAIGSRNQRLLSALQL
CHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSV
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH
TEIALASGFNSATHFSRQFKRKFGASPHFFRKGWA
HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]