| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081361
Identifier: 99081361
GI number: 99081361
Start: 1626186
End: 1626623
Strand: Reverse
Name: 99081361
Synonym: TM1040_1520
Alternate gene names: NA
Gene position: 1626623-1626186 (Counterclockwise)
Preceding gene: 99081362
Following gene: 99081351
Centisome position: 50.82
GC content: 59.13
Gene sequence:
>438_bases ATGAAGCGCCTGATCACACTTGCTTTTTGCCTTCTGGCATCGGCGCCGCTTTCGGCTCAGACGATCTCTGTCGAGGAGCT TGACCCGGTGATCGTGCAGCCGCGCGTCCCCGAAAGCCGTGAGCGTGTTGAACGCATCGAGGCAACCGAGGGTACACTTA CGAGCCTGCGCGGGCTAGATAAGGTCAACGGCAAGAGTGTCGATGTCGAGGTGCAGACCGGTGGCACGGCAGAGATCTTC GGCCTGATCGTGACTTTGCGCGAGTGCCGCTATCCAACAGAGAACCCCTCGGGGGATGCTTTTGCGTATCTGACGATCCG GGATCGCCAGGACGGCAAAGTGTTCTTTGATGGTTGGATGATTGCATCGAGCCCCGCGCTCAACGCACTCGATCATCGCC GTTACGACGTCTGGGTTCTGCGCTGCAAGAGCACCTGA
Upstream 100 bases:
>100_bases TCAACCTTGAGGCGGGTGATGAGATCGTGGACACCCAAGGGGCGGTGAGCCTGATTTCTCTGCTGGTCAAATTTGTCTCC GGCGGCGGTGACGAATCCTG
Downstream 100 bases:
>100_bases GGTGACGGGAGCGCGGGAGAGATGAAATCTCCCGGCTGGTCCAGCGCCTCGGCGAGCCTTCTGCGATAAGCCGCGCGGCT GATTTCCCGCCCCCCAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST
Sequences:
>Translated_145_residues MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST >Mature_145_residues MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16157; Mature: 16157
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLD CCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHCCC KVNGKSVDVEVQTGGTAEIFGLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWM CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE IASSPALNALDHRRYDVWVLRCKST EECCCCCCHHHCCCEEEEEEEEECC >Mature Secondary Structure MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLD CCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHCCC KVNGKSVDVEVQTGGTAEIFGLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWM CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE IASSPALNALDHRRYDVWVLRCKST EECCCCCCHHHCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA