Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081361

Identifier: 99081361

GI number: 99081361

Start: 1626186

End: 1626623

Strand: Reverse

Name: 99081361

Synonym: TM1040_1520

Alternate gene names: NA

Gene position: 1626623-1626186 (Counterclockwise)

Preceding gene: 99081362

Following gene: 99081351

Centisome position: 50.82

GC content: 59.13

Gene sequence:

>438_bases
ATGAAGCGCCTGATCACACTTGCTTTTTGCCTTCTGGCATCGGCGCCGCTTTCGGCTCAGACGATCTCTGTCGAGGAGCT
TGACCCGGTGATCGTGCAGCCGCGCGTCCCCGAAAGCCGTGAGCGTGTTGAACGCATCGAGGCAACCGAGGGTACACTTA
CGAGCCTGCGCGGGCTAGATAAGGTCAACGGCAAGAGTGTCGATGTCGAGGTGCAGACCGGTGGCACGGCAGAGATCTTC
GGCCTGATCGTGACTTTGCGCGAGTGCCGCTATCCAACAGAGAACCCCTCGGGGGATGCTTTTGCGTATCTGACGATCCG
GGATCGCCAGGACGGCAAAGTGTTCTTTGATGGTTGGATGATTGCATCGAGCCCCGCGCTCAACGCACTCGATCATCGCC
GTTACGACGTCTGGGTTCTGCGCTGCAAGAGCACCTGA

Upstream 100 bases:

>100_bases
TCAACCTTGAGGCGGGTGATGAGATCGTGGACACCCAAGGGGCGGTGAGCCTGATTTCTCTGCTGGTCAAATTTGTCTCC
GGCGGCGGTGACGAATCCTG

Downstream 100 bases:

>100_bases
GGTGACGGGAGCGCGGGAGAGATGAAATCTCCCGGCTGGTCCAGCGCCTCGGCGAGCCTTCTGCGATAAGCCGCGCGGCT
GATTTCCCGCCCCCCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF
GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST

Sequences:

>Translated_145_residues
MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF
GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST
>Mature_145_residues
MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLDKVNGKSVDVEVQTGGTAEIF
GLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWMIASSPALNALDHRRYDVWVLRCKST

Specific function: Unknown

COG id: COG4765

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16157; Mature: 16157

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLD
CCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHCCC
KVNGKSVDVEVQTGGTAEIFGLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWM
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE
IASSPALNALDHRRYDVWVLRCKST
EECCCCCCHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MKRLITLAFCLLASAPLSAQTISVEELDPVIVQPRVPESRERVERIEATEGTLTSLRGLD
CCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHCCC
KVNGKSVDVEVQTGGTAEIFGLIVTLRECRYPTENPSGDAFAYLTIRDRQDGKVFFDGWM
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE
IASSPALNALDHRRYDVWVLRCKST
EECCCCCCHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA