| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is aat
Identifier: 99081360
GI number: 99081360
Start: 1625590
End: 1626222
Strand: Direct
Name: aat
Synonym: TM1040_1519
Alternate gene names: 99081360
Gene position: 1625590-1626222 (Clockwise)
Preceding gene: 99081359
Following gene: 99081369
Centisome position: 50.78
GC content: 59.24
Gene sequence:
>633_bases ATGACGCTCAGCGCTGATCTCCTGCTTCATGCTTACGCGAACGGCGTCTTCCCCATGGCGGAGAGCCGCGACGATCCAGA GGTGTTCTGGGTCGATCCAAAGCGCCGTGGCATTCTGCCTTTGGACGGTTTTCGGATTTCTCGTTCTCTGGCCAAACGCC TTCGCCGCGATGATTACAGCATCAGCGTAAACCGCGATTTTGCGGGCGTGGTGCAGGGGTGTGCCGATCGCGAAGAGACC TGGATCAACGGTGAAATCTTTGACCGTTACCAAGAGCTGCATCACGACGGATTTGCTCACTCTCTCGAAGTCTGGATGGA CGATGCGCTGGTGGGGGGCGTCTACGGCGTCTCACTTGGGGGCGCCTTTTTTGGCGAAAGCATGTTCTCGCGCCGGCGAG ATGCCTCCAAGATTGCACTCGCCTATCTCGTGGATCGTCTGAACGCAGGCGGCTACATTCTATGTGACACCCAGTTCATC ACGCCTCATCTGGCGTCTCTTGGGGGGCGGGAAATCAGCCGCGCGGCTTATCGCAGAAGGCTCGCCGAGGCGCTGGACCA GCCGGGAGATTTCATCTCTCCCGCGCTCCCGTCACCTCAGGTGCTCTTGCAGCGCAGAACCCAGACGTCGTAA
Upstream 100 bases:
>100_bases TGGAAAAATGGCTTGAAGCCAACCTTCAGGCCTGAGACATCTTTCTGGGGGCGGCGGTTTAAAACCTCCGCCCCTCTGCT ACCCCGTGCTAGGCTAATCT
Downstream 100 bases:
>100_bases CGGCGATGATCGAGTGCGTTGAGCGCGGGGCTCGATGCAATCATCCAACCATCAAAGAACACTTTGCCGTCCTGGCGATC CCGGATCGTCAGATACGCAA
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTLSADLLLHAYANGVFPMAESRDDPEVFWVDPKRRGILPLDGFRISRSLAKRLRRDDYSISVNRDFAGVVQGCADREET WINGEIFDRYQELHHDGFAHSLEVWMDDALVGGVYGVSLGGAFFGESMFSRRRDASKIALAYLVDRLNAGGYILCDTQFI TPHLASLGGREISRAAYRRRLAEALDQPGDFISPALPSPQVLLQRRTQTS
Sequences:
>Translated_210_residues MTLSADLLLHAYANGVFPMAESRDDPEVFWVDPKRRGILPLDGFRISRSLAKRLRRDDYSISVNRDFAGVVQGCADREET WINGEIFDRYQELHHDGFAHSLEVWMDDALVGGVYGVSLGGAFFGESMFSRRRDASKIALAYLVDRLNAGGYILCDTQFI TPHLASLGGREISRAAYRRRLAEALDQPGDFISPALPSPQVLLQRRTQTS >Mature_209_residues TLSADLLLHAYANGVFPMAESRDDPEVFWVDPKRRGILPLDGFRISRSLAKRLRRDDYSISVNRDFAGVVQGCADREETW INGEIFDRYQELHHDGFAHSLEVWMDDALVGGVYGVSLGGAFFGESMFSRRRDASKIALAYLVDRLNAGGYILCDTQFIT PHLASLGGREISRAAYRRRLAEALDQPGDFISPALPSPQVLLQRRTQTS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=203, Percent_Identity=43.3497536945813, Blast_Score=140, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_SILST (Q1GGG4)
Other databases:
- EMBL: CP000377 - RefSeq: YP_613514.1 - ProteinModelPortal: Q1GGG4 - SMR: Q1GGG4 - STRING: Q1GGG4 - GeneID: 4077075 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_1519 - NMPDR: fig|292414.1.peg.3380 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: IGESMFY - PhylomeDB: Q1GGG4 - ProtClustDB: PRK00301 - BioCyc: SSP292414:TM1040_1519-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 23538; Mature: 23407
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSADLLLHAYANGVFPMAESRDDPEVFWVDPKRRGILPLDGFRISRSLAKRLRRDDYS CCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCE ISVNRDFAGVVQGCADREETWINGEIFDRYQELHHDGFAHSLEVWMDDALVGGVYGVSLG EEECCCHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GAFFGESMFSRRRDASKIALAYLVDRLNAGGYILCDTQFITPHLASLGGREISRAAYRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHH LAEALDQPGDFISPALPSPQVLLQRRTQTS HHHHHCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure TLSADLLLHAYANGVFPMAESRDDPEVFWVDPKRRGILPLDGFRISRSLAKRLRRDDYS CCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCE ISVNRDFAGVVQGCADREETWINGEIFDRYQELHHDGFAHSLEVWMDDALVGGVYGVSLG EEECCCHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GAFFGESMFSRRRDASKIALAYLVDRLNAGGYILCDTQFITPHLASLGGREISRAAYRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHH LAEALDQPGDFISPALPSPQVLLQRRTQTS HHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA