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The map label for this gene is 99081357

Identifier: 99081357

GI number: 99081357

Start: 1622952

End: 1623500

Strand: Direct

Name: 99081357

Synonym: TM1040_1516

Alternate gene names: NA

Gene position: 1622952-1623500 (Clockwise)

Preceding gene: 99081356

Following gene: 99081358

Centisome position: 50.7

GC content: 58.83

Gene sequence:

>549_bases
ATGTCTGATCCCGCAACTGATCCCGCTTTTGACTATGCGCCTGTTGGACTTGCGCTTTTGGAACATCGCATCATCAAGCG
GTGCAATCTGCTCTTTGCCGAGATCTTTGACGCCCCCCCAGAGGCGCTTTGCGAGACACCAATTGCTGCGCTTTATCCCA
GCGCCGAGGATTACCAGCGCATAGGCGAGATCTTGCAGTTGCCGGAATCACAAAGCGGAATCTACCACGACGAACGCATT
ATGCGTCGCACGTCGGGCGCGCTGTTCTGGTGCCGGGTGCGCGGGCGATCCCTCGACGGTGCGCGCCCGTTTCAGGCCGG
TGTATGGTCCTTTGCCGATCTCTCCGAGGAGCGCCCCGTTGTCAGCCTGACCCCACGCGAACGCGAAGTCGCGATCCTCA
CCTGTCGGGGGCTCTCGGCCAAGGAAATTGGCCTCAAACTGGATCTCTCCTATCGTACGGTAGAGACTCACCGGGCGCGC
CTCTTGGTGAAATTCAACGCCAAAAAGCTGCCCGAACTGGTCGCAAAACTCAGTGGCATGCCTCTTTGA

Upstream 100 bases:

>100_bases
TCCGGCTTTTTTCACACACCTCGACGGGGGTGAGCAGACCTTGCGGCCGTGACACACATGCGCCCTTCCCTTGCGCCAAG
GCCCGCTTTAGAACCGGGCC

Downstream 100 bases:

>100_bases
AGCCCGCAGAGAGGCCGATATTTCCCTGCAAAAATGATTGAAAAGAGAGGCTTTCCCCCTCATCTTCAGAGGCAATCAAG
CACGCTTTCCTTATGGTCAG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcriptional Regulator Luxr Family; Transcription Regulator Protein; LuxR Family Regulatory Protein; PAS Domain-Containing Protein

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSDPATDPAFDYAPVGLALLEHRIIKRCNLLFAEIFDAPPEALCETPIAALYPSAEDYQRIGEILQLPESQSGIYHDERI
MRRTSGALFWCRVRGRSLDGARPFQAGVWSFADLSEERPVVSLTPREREVAILTCRGLSAKEIGLKLDLSYRTVETHRAR
LLVKFNAKKLPELVAKLSGMPL

Sequences:

>Translated_182_residues
MSDPATDPAFDYAPVGLALLEHRIIKRCNLLFAEIFDAPPEALCETPIAALYPSAEDYQRIGEILQLPESQSGIYHDERI
MRRTSGALFWCRVRGRSLDGARPFQAGVWSFADLSEERPVVSLTPREREVAILTCRGLSAKEIGLKLDLSYRTVETHRAR
LLVKFNAKKLPELVAKLSGMPL
>Mature_181_residues
SDPATDPAFDYAPVGLALLEHRIIKRCNLLFAEIFDAPPEALCETPIAALYPSAEDYQRIGEILQLPESQSGIYHDERIM
RRTSGALFWCRVRGRSLDGARPFQAGVWSFADLSEERPVVSLTPREREVAILTCRGLSAKEIGLKLDLSYRTVETHRARL
LVKFNAKKLPELVAKLSGMPL

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20396; Mature: 20265

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPATDPAFDYAPVGLALLEHRIIKRCNLLFAEIFDAPPEALCETPIAALYPSAEDYQR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHH
IGEILQLPESQSGIYHDERIMRRTSGALFWCRVRGRSLDGARPFQAGVWSFADLSEERPV
HHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCE
VSLTPREREVAILTCRGLSAKEIGLKLDLSYRTVETHRARLLVKFNAKKLPELVAKLSGM
EEECCCCCEEEEEEECCCCHHHCCEEEECCEEEHHHHHEEEEEEECHHHHHHHHHHHCCC
PL
CC
>Mature Secondary Structure 
SDPATDPAFDYAPVGLALLEHRIIKRCNLLFAEIFDAPPEALCETPIAALYPSAEDYQR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHH
IGEILQLPESQSGIYHDERIMRRTSGALFWCRVRGRSLDGARPFQAGVWSFADLSEERPV
HHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCE
VSLTPREREVAILTCRGLSAKEIGLKLDLSYRTVETHRARLLVKFNAKKLPELVAKLSGM
EEECCCCCEEEEEEECCCCHHHCCEEEECCEEEHHHHHEEEEEEECHHHHHHHHHHHCCC
PL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA