| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is blh [H]
Identifier: 99081346
GI number: 99081346
Start: 1610302
End: 1610730
Strand: Direct
Name: blh [H]
Synonym: TM1040_1505
Alternate gene names: 99081346
Gene position: 1610302-1610730 (Clockwise)
Preceding gene: 99081344
Following gene: 99081352
Centisome position: 50.31
GC content: 59.44
Gene sequence:
>429_bases ATGGATGCACGCACATTGACCCCCCGCTACTCGGTTTCTCCGCAGATCTCCGTGGAGGATATTCCCGCAATCAAAGCCGC CGGTTTTACAACGGTGATCTGCAACAGACCTGATGCAGAAGTCCCGCCCAGCCATCAGGCCGAGGCGATCCGCGCAGCCG TCGAAGACGCCGGGTTGTCTTTTCAGGTCCTGCCGCTCACCCACCAGACGATGACGCCGGAAAACGTTGAAAAACAAGGC GCTTTTGTCCAAAGTTCAGAAGGTCCGGTGCTGGCGTATTGCGCCTCGGGCACGCGGTGTTCCGTGATCTGGGCGCTGGG TCAGGTGGCCAATCCAGAGATTTCGGTGGATGACATCATGTCGACCACGCAGGAGGCTGGGTATGATCTTTCGGGCCTGC GCCCCACGCTTGAGGCCCTTAAGGGGTAG
Upstream 100 bases:
>100_bases GTGTATTCCGGTCCTGCAGGACCAAAACCCCTGCCCGAGATCGAACCTGTACGGCGCTTCGATCTAGACCAATGCGGGAC AAAGGCGTAAACGATACCGC
Downstream 100 bases:
>100_bases TCTCCGCCACGGATTCCCGAGCGCGGATCTCCGGGCGATTGTCCCGGCATCACGCGAAGGAAACGCCCTGACGAAGATCA GTCGCAATGACGGCCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG
Sequences:
>Translated_142_residues MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG >Mature_142_residues MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 15072; Mature: 15072
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCE FQVLPLTHQTMTPENVEKQGAFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIM EEEEECCCCCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHH STTQEAGYDLSGLRPTLEALKG HHHHHCCCCCCCCCHHHHHHCC >Mature Secondary Structure MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCE FQVLPLTHQTMTPENVEKQGAFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIM EEEEECCCCCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHH STTQEAGYDLSGLRPTLEALKG HHHHHCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]