| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is tauC [C]
Identifier: 99081336
GI number: 99081336
Start: 1600230
End: 1601147
Strand: Reverse
Name: tauC [C]
Synonym: TM1040_1495
Alternate gene names: 99081336
Gene position: 1601147-1600230 (Counterclockwise)
Preceding gene: 99081337
Following gene: 99081335
Centisome position: 50.02
GC content: 60.35
Gene sequence:
>918_bases ATGAAGACGTTTATGGCCGTCCTAACCGTGGTCGCGGGGATTATTGGCCTCTGGTATCTTGCCTGCGTGCCGATGAACAT CAAGGGGGTGCTGGACGCCGCTGAGCGGGCAGGGGAGCAGGTGGAGCCTGCAACCGCGCGTGAGCGTCGAGACGCTTCGG CACTTGGACTTGTGGTTCAGAACAGCTTTGCGATTTCGCGTGCATGGTCGGTGGAGCGCCCGCGCTTGCCGGCGCCGCAT CAGGTCGCCACAGAGCTCTGGGACACCACGGTGATGAAGAAGATCACCTCCAAACGCAGCCTGATCTATCATGGGCAAGT GACGCTCTCCGCGACGCTTCTTGGATTTGCGATCGGCACAGGGCTTGGCATCCTGCTTGCGGTCGGGATCGTGCATTCCA GAGTCATGGACATGTCGGTGATGCCCTGGGCCATCGTGAGCCAGACCATTCCGATCATCGCGCTGGCGCCAATGATCATC GTCGTCTTGTATTCCATTGGCGTACAAGGGCTTTTGCCCAAGGCGATCATCGCCGCCTACCTCAGTTTCTTTCCTGTGGT GGTCGGTATGGTCAAAGGCTTGCGCAGCCCGGATCACATGCAGCTTGATCTGATGAAGACCTACAACGCCTCGCAGGGGC AGGTGTTCTGGAAGCTGCGTCTGCCCTCGTCGATGCCTTATCTCTTTGCCTCGCTCAAGATCGGCATTGCGGCCTCGCTC GTGGGGGCCATCGTTGGGGAATTGCCGACTGGTGCGGTCGCAGGGCTTGGCGCGCGGCTTCTGGCAGGAAGCTACTACGG TCAGACGGTGCAGATCTGGTCGGCGCTTTTTGCAGCGGCCATCTTGGCTGCGGCTCTGGTGGCGCTCCTCGGAGTACTCG AGCGCATGCTGCTTGGGCGTATGGGGGTGAAACCATGA
Upstream 100 bases:
>100_bases TCGCGACACGCCGGAGTTCATCGAGATTTCGCATCGCGTGCGTGAGGGGCTTCGTGCGGGGCATGCTCATGACTGAGGAT TTTGCAATGGAGGGCGGCGT
Downstream 100 bases:
>100_bases GTGGAAAACGTCTGATGGCAACCCGGCCCCAAACTCCTCTGGAGGTGCGCTGATGTATTTGGTTTTCTTAGCTGCAGTAG TCTGGTGCGCGGGGTGGTGG
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKTFMAVLTVVAGIIGLWYLACVPMNIKGVLDAAERAGEQVEPATARERRDASALGLVVQNSFAISRAWSVERPRLPAPH QVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMII VVLYSIGVQGLLPKAIIAAYLSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASL VGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALVALLGVLERMLLGRMGVKP
Sequences:
>Translated_305_residues MKTFMAVLTVVAGIIGLWYLACVPMNIKGVLDAAERAGEQVEPATARERRDASALGLVVQNSFAISRAWSVERPRLPAPH QVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMII VVLYSIGVQGLLPKAIIAAYLSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASL VGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALVALLGVLERMLLGRMGVKP >Mature_305_residues MKTFMAVLTVVAGIIGLWYLACVPMNIKGVLDAAERAGEQVEPATARERRDASALGLVVQNSFAISRAWSVERPRLPAPH QVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMII VVLYSIGVQGLLPKAIIAAYLSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASL VGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALVALLGVLERMLLGRMGVKP
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32477; Mature: 32477
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFMAVLTVVAGIIGLWYLACVPMNIKGVLDAAERAGEQVEPATARERRDASALGLVVQ CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHH NSFAISRAWSVERPRLPAPHQVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGT CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHH GLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGLLPKAIIAAY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHH LSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASL HHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH VGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALVALLGVLERMLLGR HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVKP CCCCC >Mature Secondary Structure MKTFMAVLTVVAGIIGLWYLACVPMNIKGVLDAAERAGEQVEPATARERRDASALGLVVQ CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHH NSFAISRAWSVERPRLPAPHQVATELWDTTVMKKITSKRSLIYHGQVTLSATLLGFAIGT CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHH GLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSIGVQGLLPKAIIAAY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHH LSFFPVVVGMVKGLRSPDHMQLDLMKTYNASQGQVFWKLRLPSSMPYLFASLKIGIAASL HHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH VGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALVALLGVLERMLLGR HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVKP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]