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The map label for this gene is ssuC [C]

Identifier: 99081335

GI number: 99081335

Start: 1599332

End: 1600177

Strand: Reverse

Name: ssuC [C]

Synonym: TM1040_1494

Alternate gene names: 99081335

Gene position: 1600177-1599332 (Counterclockwise)

Preceding gene: 99081336

Following gene: 99081334

Centisome position: 49.99

GC content: 61.23

Gene sequence:

>846_bases
ATGTATTTGGTTTTCTTAGCTGCAGTAGTCTGGTGCGCGGGGTGGTGGATCAACACTCGCCTTGCCAATGGGCCAAAGGC
GGATAGCCGTGCGGTGGGCCTCCTGGTGCCGGCGATCTTTGGGGTGACAATCCTCATCGTCTGGGAGCTGCTGGTGCGCG
GCCTTGAGGTCCCGCTGGTGATCTTGCCCGCGCCCTCGTTGATTGCCGAGCGATTTGCGGCGAGCCTGCCGATCCTTTGG
GCAGACTTCAGCCAGACCATCCTCAAAGGGGCGCTGGGTGGCTATGTGATCGGCTGTGGCGCGGCGTTTCTGACCGCCAT
TTTGGTGGATCGCAGTGATTTCCTGCGTCGCGGGCTGTTGCCGGTGGGGAATTTCGTCGCGGCGCTGCCGATTGTTGGCA
CCGCGCCGATCCTGGTGATGTGGTTTGGCTTTGACTGGCAGTCCAAGGCGGCCGTGGTCGTGGTGATGGTGTTCTTCCCG
ATGCTGGTGAACACCGTGGCCGGGCTGCGCGAAACCGACCAGATGCAACGCGATCTGATGCGCACCTATGCCGCGTCCTA
TTGGCAGAGCCTCATCAAACTGCGCTTGCCTGCGGCCTTGCCGTTTGTCTTCAATGGTCTCAAGATCTCGACAACCCTGG
CGCTGATCGGGGCAATCGTGGCGGAGTTCTTTGGCTCGCCAACGGTTGGGATGGGGTTCCGGATCTCCACCTCGGTCGGG
CAGCTTGCGCTTGATATGGTGTGGGCCGAGATCGTTGTCGCTGCGCTCGCAGGCTCGCTCTTTTATGGGCTCGTGGCTCT
CTTGGAGAAGTCACTAACCTTCTGGCACCCGTCCCAACGGGGCTGA

Upstream 100 bases:

>100_bases
GGAGTACTCGAGCGCATGCTGCTTGGGCGTATGGGGGTGAAACCATGAGTGGAAAACGTCTGATGGCAACCCGGCCCCAA
ACTCCTCTGGAGGTGCGCTG

Downstream 100 bases:

>100_bases
CAAAAACGCGTGTCCCTGCGCGACGTGGGGGCACATCATCATTTGGGCGCAAGGTGCTGTATAGAGGGATAAATCCCCGC
CATGCCCGGTGCCCAAGTCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MYLVFLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLVILPAPSLIAERFAASLPILW
ADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFP
MLVNTVAGLRETDQMQRDLMRTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGSPTVGMGFRISTSVG
QLALDMVWAEIVVAALAGSLFYGLVALLEKSLTFWHPSQRG

Sequences:

>Translated_281_residues
MYLVFLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLVILPAPSLIAERFAASLPILW
ADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFP
MLVNTVAGLRETDQMQRDLMRTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGSPTVGMGFRISTSVG
QLALDMVWAEIVVAALAGSLFYGLVALLEKSLTFWHPSQRG
>Mature_281_residues
MYLVFLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLVILPAPSLIAERFAASLPILW
ADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLLPVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFP
MLVNTVAGLRETDQMQRDLMRTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGSPTVGMGFRISTSVG
QLALDMVWAEIVVAALAGSLFYGLVALLEKSLTFWHPSQRG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=152, Percent_Identity=30.2631578947368, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786564, Length=161, Percent_Identity=30.4347826086957, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30417; Mature: 30417

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVFLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLV
CHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ILPAPSLIAERFAASLPILWADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLL
EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFPMLVNTVAGLRETDQMQRDLM
CHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGSPTVGMGFRISTSVG
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHH
QLALDMVWAEIVVAALAGSLFYGLVALLEKSLTFWHPSQRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYLVFLAAVVWCAGWWINTRLANGPKADSRAVGLLVPAIFGVTILIVWELLVRGLEVPLV
CHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ILPAPSLIAERFAASLPILWADFSQTILKGALGGYVIGCGAAFLTAILVDRSDFLRRGLL
EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PVGNFVAALPIVGTAPILVMWFGFDWQSKAAVVVVMVFFPMLVNTVAGLRETDQMQRDLM
CHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RTYAASYWQSLIKLRLPAALPFVFNGLKISTTLALIGAIVAEFFGSPTVGMGFRISTSVG
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHH
QLALDMVWAEIVVAALAGSLFYGLVALLEKSLTFWHPSQRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]