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The map label for this gene is 99081334

Identifier: 99081334

GI number: 99081334

Start: 1598143

End: 1599129

Strand: Reverse

Name: 99081334

Synonym: TM1040_1493

Alternate gene names: NA

Gene position: 1599129-1598143 (Counterclockwise)

Preceding gene: 99081335

Following gene: 99081333

Centisome position: 49.96

GC content: 59.07

Gene sequence:

>987_bases
ATGAAAAACGTGCTAACAGCCGCCGCCATGGCACTGATGGCAACCTCTGCTGCGCAGGCCGCAGATGAGGTGAAGCTGCA
ACTGAAATGGGTCACCCAGGCGCAGTTTGCAGGCTACTATGTGGCGCTGGACAAAGGGTTTTACGGGGAAGAAGAGCTGG
ATGTGACCATTCTTCCCGGTGGCCCCGACATCGCGCCCACGCAGGTGATCGCAGGGGGCGGCGCGGATGTGACCGTGGAA
TGGATGCCCGCAGCTCTGGCTGCGCGGGAAAAGGGGCTGCCGCTGGTCAACATTGCCCAGCCGTTCAAATCTTCTGGCAT
GATGCTCACCTGCTGGAAAGACACCGGCATCTCTGCACCCAAGGATCTCGCGGATCGCACTCTTGGGGTCTGGTTCTTCG
GCAATGAGTTCCCCTTCATGAGCTGGATGGGCAAGCTCGGTATCTCGACAGAGGGCAAGGGTCCCGAAGGCGTAGAGGTT
TTGAAACAGGGCTTTAACGTCGATCCTCTGCTGCAGCGGCAGGCCGATTGCATCTCCACCATGACCTATAACGAATATTG
GCAGGTGATTGATGCGGGGGTCTCGGCTGATGAGCTTGTGACCTTCAAATACGAGGACCAAGGCGTCGCAACGCTCGAGG
ATGGCCTCTATGTGCTCGAGGACAACCTCTCCGATCCGGCCTTCGTCGACAAAATGGAGCGCTTTGTCCGAGCGTCTATG
AAGGGTTGGAAATACGCCGAAGAGAACCCGGAGGAGGCCGCAGAAATCGTGCTCGACAATGATGCCTCTGGTGCCCAGAC
CGAAACCCACCAAAAGCGGATGATGGGCGAGATTGCCAAACTCACTTCCGGCAGCAATGGCGCGCTTGACGTGGCAGACT
ACGAGCGCACGGTGCAGACCCTGCTGAGCGGCGGCTCTGACCCGGTCATCACCAAGGCGCCTGAAGGGGCGTGGACCCAT
GCGATCACCGATGCGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
TGCGAAACCAAGGGATCGATCGTCAATTAATGGCAAATCTTTTGCGTGTCGATCTCAACTCGCGCATGATTTCATCATAA
CCAACAGGGAGTTCAATCTG

Downstream 100 bases:

>100_bases
TTTCGCACCACGGTAATGCCATCGTAAATTAACTGGATACCCAGCCGAGGCTTCGGCTGGGTATCGTCAATTTTAAGAGA
AAGTAACATTCTGTTAAGGG

Product: ABC transporter, periplasmic substrate-binding protein

Products: NA

Alternate protein names: Diguanylate Cyclase; NMT1/THI5-Like Domain-Containing Protein; Histidine Kinase; ABC Transporter Periplasmic; Twin-Arginine Translocation Pathway Signal; NMT1/THI5 Like Domain-Containing Protein; GGDEF Domain-Containing Protein; NMT1/THI5-Like Protein; NMT1/THI5 Like Family; PAS Sensor Protein; Sensory Box Histidine Kinase; PAS/PAC Sensor-Containg Diguanylate Cyclase; Thiamine Biosynthesis Protein; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase With PAS/PAC Sensor; PAS/GGDEF Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; ABC Transporter; Periplasmic-Component Of ABC Transporter; Diguanylate Cyclase With Extracellular Sensor; PasGgdef; Two-Component Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Nlpa Lipoprotein; NLPA Lipoprotein; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; NMT1/THI5-Ike Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; PAS/PAC Sensor-Containing Diguanylate Cyclase; NMT1/THI5 Like Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKNVLTAAAMALMATSAAQAADEVKLQLKWVTQAQFAGYYVALDKGFYGEEELDVTILPGGPDIAPTQVIAGGGADVTVE
WMPAALAAREKGLPLVNIAQPFKSSGMMLTCWKDTGISAPKDLADRTLGVWFFGNEFPFMSWMGKLGISTEGKGPEGVEV
LKQGFNVDPLLQRQADCISTMTYNEYWQVIDAGVSADELVTFKYEDQGVATLEDGLYVLEDNLSDPAFVDKMERFVRASM
KGWKYAEENPEEAAEIVLDNDASGAQTETHQKRMMGEIAKLTSGSNGALDVADYERTVQTLLSGGSDPVITKAPEGAWTH
AITDAALN

Sequences:

>Translated_328_residues
MKNVLTAAAMALMATSAAQAADEVKLQLKWVTQAQFAGYYVALDKGFYGEEELDVTILPGGPDIAPTQVIAGGGADVTVE
WMPAALAAREKGLPLVNIAQPFKSSGMMLTCWKDTGISAPKDLADRTLGVWFFGNEFPFMSWMGKLGISTEGKGPEGVEV
LKQGFNVDPLLQRQADCISTMTYNEYWQVIDAGVSADELVTFKYEDQGVATLEDGLYVLEDNLSDPAFVDKMERFVRASM
KGWKYAEENPEEAAEIVLDNDASGAQTETHQKRMMGEIAKLTSGSNGALDVADYERTVQTLLSGGSDPVITKAPEGAWTH
AITDAALN
>Mature_328_residues
MKNVLTAAAMALMATSAAQAADEVKLQLKWVTQAQFAGYYVALDKGFYGEEELDVTILPGGPDIAPTQVIAGGGADVTVE
WMPAALAAREKGLPLVNIAQPFKSSGMMLTCWKDTGISAPKDLADRTLGVWFFGNEFPFMSWMGKLGISTEGKGPEGVEV
LKQGFNVDPLLQRQADCISTMTYNEYWQVIDAGVSADELVTFKYEDQGVATLEDGLYVLEDNLSDPAFVDKMERFVRASM
KGWKYAEENPEEAAEIVLDNDASGAQTETHQKRMMGEIAKLTSGSNGALDVADYERTVQTLLSGGSDPVITKAPEGAWTH
AITDAALN

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35413; Mature: 35413

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVLTAAAMALMATSAAQAADEVKLQLKWVTQAQFAGYYVALDKGFYGEEELDVTILPG
CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCEEEEEEECCCCCCCCEEEEEECC
GPDIAPTQVIAGGGADVTVEWMPAALAAREKGLPLVNIAQPFKSSGMMLTCWKDTGISAP
CCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCC
KDLADRTLGVWFFGNEFPFMSWMGKLGISTEGKGPEGVEVLKQGFNVDPLLQRQADCIST
HHHHHCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
MTYNEYWQVIDAGVSADELVTFKYEDQGVATLEDGLYVLEDNLSDPAFVDKMERFVRASM
HHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
KGWKYAEENPEEAAEIVLDNDASGAQTETHQKRMMGEIAKLTSGSNGALDVADYERTVQT
CCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
LLSGGSDPVITKAPEGAWTHAITDAALN
HHCCCCCCEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKNVLTAAAMALMATSAAQAADEVKLQLKWVTQAQFAGYYVALDKGFYGEEELDVTILPG
CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCEEEEEEECCCCCCCCEEEEEECC
GPDIAPTQVIAGGGADVTVEWMPAALAAREKGLPLVNIAQPFKSSGMMLTCWKDTGISAP
CCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCC
KDLADRTLGVWFFGNEFPFMSWMGKLGISTEGKGPEGVEVLKQGFNVDPLLQRQADCIST
HHHHHCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
MTYNEYWQVIDAGVSADELVTFKYEDQGVATLEDGLYVLEDNLSDPAFVDKMERFVRASM
HHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
KGWKYAEENPEEAAEIVLDNDASGAQTETHQKRMMGEIAKLTSGSNGALDVADYERTVQT
CCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
LLSGGSDPVITKAPEGAWTHAITDAALN
HHCCCCCCEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA