| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ntaB [H]
Identifier: 99081332
GI number: 99081332
Start: 1596744
End: 1597244
Strand: Direct
Name: ntaB [H]
Synonym: TM1040_1491
Alternate gene names: 99081332
Gene position: 1596744-1597244 (Clockwise)
Preceding gene: 99081331
Following gene: 99081340
Centisome position: 49.88
GC content: 60.48
Gene sequence:
>501_bases ATGACCCTTACCAGCTTCACTCCCGGCCCCGACACTCAGGCAGAGATGCGTGCGGCATTGGGGTGTTTTGCAACCGGTGT GGTCGTGGTCACAACACAGACTGAGCGCGGACCGCTTGCGATGACCGTCAACAGCTTCACCTCTGTCTCGCTGACGCCGC CGCTGGTGCTGTGGTGTCCGGCCGTACACTCGAAGCGGCATGACCCATTTGTGGGGGCCAAACACTTCTCGATTCATGTG ATGGCCGAAGATCACATGGATGCAGCGCTGCATTTTGCCCGCCATGGCGAGGCCTTTGACGTCCACCCCTGGAGCCGGAA CACGCAAAATCAGCCCGTTCTCGACGACGCAATGGTCCGCCTGGACTGCGCCCATCACGCCGCCCACCCAGGTGGCGATC ACACCATTTTGGTGGGTGAAGTCCTGAACGTCAGCCGCCGCGCCGATCTGGGACCCGGTTTGGTATTCCATCAGGGCAAA TACGGTCGTTTTTCCGACTGA
Upstream 100 bases:
>100_bases TTTTCTTTTGCATCCAAGGGCAGAGGTTGAAATAAGGGCGAGGCCCGCTATCCCTCAGAGGCACGCGCAGCATTGATGAC AGCAACGGATCCCCTGCCCC
Downstream 100 bases:
>100_bases CTTTTCAACAGAGCGCCCGGTAGCTCCTCAGGCTCAGATACCCCGGTGCGCCCTCAGGCGCTGCACAGGACTGTAGCAAC CGGTAGGATTGACAGCACCC
Product: flavin reductase-like, FMN-binding
Products: NA
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTLTSFTPGPDTQAEMRAALGCFATGVVVVTTQTERGPLAMTVNSFTSVSLTPPLVLWCPAVHSKRHDPFVGAKHFSIHV MAEDHMDAALHFARHGEAFDVHPWSRNTQNQPVLDDAMVRLDCAHHAAHPGGDHTILVGEVLNVSRRADLGPGLVFHQGK YGRFSD
Sequences:
>Translated_166_residues MTLTSFTPGPDTQAEMRAALGCFATGVVVVTTQTERGPLAMTVNSFTSVSLTPPLVLWCPAVHSKRHDPFVGAKHFSIHV MAEDHMDAALHFARHGEAFDVHPWSRNTQNQPVLDDAMVRLDCAHHAAHPGGDHTILVGEVLNVSRRADLGPGLVFHQGK YGRFSD >Mature_165_residues TLTSFTPGPDTQAEMRAALGCFATGVVVVTTQTERGPLAMTVNSFTSVSLTPPLVLWCPAVHSKRHDPFVGAKHFSIHVM AEDHMDAALHFARHGEAFDVHPWSRNTQNQPVLDDAMVRLDCAHHAAHPGGDHTILVGEVLNVSRRADLGPGLVFHQGKY GRFSD
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 18056; Mature: 17924
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSFTPGPDTQAEMRAALGCFATGVVVVTTQTERGPLAMTVNSFTSVSLTPPLVLWCP CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCEEEECCCCEEEEEC AVHSKRHDPFVGAKHFSIHVMAEDHMDAALHFARHGEAFDVHPWSRNTQNQPVLDDAMVR CHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH LDCAHHAAHPGGDHTILVGEVLNVSRRADLGPGLVFHQGKYGRFSD HHHHHHCCCCCCCCEEEEEHHHCCHHCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure TLTSFTPGPDTQAEMRAALGCFATGVVVVTTQTERGPLAMTVNSFTSVSLTPPLVLWCP CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCEEEECCCCEEEEEC AVHSKRHDPFVGAKHFSIHVMAEDHMDAALHFARHGEAFDVHPWSRNTQNQPVLDDAMVR CHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH LDCAHHAAHPGGDHTILVGEVLNVSRRADLGPGLVFHQGKYGRFSD HHHHHHCCCCCCCCEEEEEHHHCCHHCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]