Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081307

Identifier: 99081307

GI number: 99081307

Start: 1566817

End: 1567134

Strand: Direct

Name: 99081307

Synonym: TM1040_1466

Alternate gene names: NA

Gene position: 1566817-1567134 (Clockwise)

Preceding gene: 99081299

Following gene: 99081308

Centisome position: 48.95

GC content: 59.43

Gene sequence:

>318_bases
ATGACAACATTTGATGACCGCGAGAAGGCATTCGAAAACAAGTTTGCGCATGACGCTGAACTGAAGTTCCGCGCAACCGC
GCGCCGCAACAAGCTGCTGGGCCTTTGGGCCGCGGATCTGTTGGGGCACAGGGACGAAGCGGCAGAAGCCTATGCCCAGA
CCGTCATTATCGCCGACCTGGATGAACCGGGCGACGACGATGTCCTCGCCAAGCTCGCCACCGACCTCGAAGGCATGGTC
GAACGCGCAGCCATCCGGGACAAGATGATGGAGCTGATGATGCAGGTGGCAGAAGACCTCCCCCAAACCGATACCTGA

Upstream 100 bases:

>100_bases
ACCTCTCCGTCCTGATGTGCTATCCTGCGCTCAGGGCCAAGAGGGCCAAGAGCGGATATTCTGACGCCCCACTGGCCCAC
TTCTTATGGGAGGACGTGAG

Downstream 100 bases:

>100_bases
TCCCGGCACCCGGCCCGCGCAGATGCGTGAGGCACAGAGCTGCCGGTCCCTGAACCGGCAGGCACGCGTTCCGCAAAACG
GGCGACGTCTGCTCCAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMV
ERAAIRDKMMELMMQVAEDLPQTDT

Sequences:

>Translated_105_residues
MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMV
ERAAIRDKMMELMMQVAEDLPQTDT
>Mature_104_residues
TTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMVE
RAAIRDKMMELMMQVAEDLPQTDT

Specific function: Unknown

COG id: COG5467

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11827; Mature: 11696

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC
DEPGDDDVLAKLATDLEGMVERAAIRDKMMELMMQVAEDLPQTDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC
DEPGDDDVLAKLATDLEGMVERAAIRDKMMELMMQVAEDLPQTDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA