| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081271
Identifier: 99081271
GI number: 99081271
Start: 1528316
End: 1528465
Strand: Reverse
Name: 99081271
Synonym: TM1040_1430
Alternate gene names: NA
Gene position: 1528465-1528316 (Counterclockwise)
Preceding gene: 99081275
Following gene: 99081270
Centisome position: 47.75
GC content: 51.33
Gene sequence:
>150_bases ATGGCACGTTTGATAAAATACCTTGCTATTCTTATTGTACTCGCCGCAATCGCACTGATTGCTTATGCGTATGTGGGGCC TTGGTTTGGGGCGGATTTCTCGGCGCCCTCGGAAGAAGTGCGCAAGCCTGTGGTGCTCAATGCCGACTAA
Upstream 100 bases:
>100_bases TGGTGATTTTCGCTCATTCTTCTGTGAATGACGTGATATTGGCAAAAAGGCCATATATAAAACTCTCAAAACACACAAAG AAGCAGGCTCCGGGACACCC
Downstream 100 bases:
>100_bases GACTGCATCGCTGGCGATCGGCGTCTTTTTGCTTGCGAGCGCGCCCGGAGACGCGCGCGAGCCGCTGGCCGCGATTGACT GGCTCAACAGTGCGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MARLIKYLAILIVLAAIALIAYAYVGPWFGADFSAPSEEVRKPVVLNAD
Sequences:
>Translated_49_residues MARLIKYLAILIVLAAIALIAYAYVGPWFGADFSAPSEEVRKPVVLNAD >Mature_48_residues ARLIKYLAILIVLAAIALIAYAYVGPWFGADFSAPSEEVRKPVVLNAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5321; Mature: 5190
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLIKYLAILIVLAAIALIAYAYVGPWFGADFSAPSEEVRKPVVLNAD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure ARLIKYLAILIVLAAIALIAYAYVGPWFGADFSAPSEEVRKPVVLNAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA