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The map label for this gene is 99081236

Identifier: 99081236

GI number: 99081236

Start: 1487653

End: 1488147

Strand: Direct

Name: 99081236

Synonym: TM1040_1395

Alternate gene names: NA

Gene position: 1487653-1488147 (Clockwise)

Preceding gene: 99081234

Following gene: 99081237

Centisome position: 46.48

GC content: 61.21

Gene sequence:

>495_bases
ATGTATGAGGAACACGGTGCAAGGGAAACCCAGGAACACGACATGTCCGGCGAAACCGATCTGATCAAGCTCTACTCCAC
CAAGATCCTCGCACTGGCGGCTGATATTCCCCATCTTGGGCATCTCGAGCAGGCCGATGCCACGGTAAAACGCCGCTCGC
CGCTTTGCGGATCAACAGTGACGGTGGATGTGACCCTTGAGGACGGAAAAGTCGCGCAGTTTGCGCAGGACGTCAAAGCC
TGCGCTTTGGGTCAGGCTGCAGCTGCCGTTGTGGGCGCCGCCATCATCGGACGCAGCGCTGCCGAGGTGGAGCGGGCCCG
TGATCAGCTGAAGGCAATGCTCACCGAAGGCGGGCCGGTGCCGGAGGCTCCGTTCGACGGGCTCGAAGTACTGATCCCTG
CGCGGGACTTCAAAAACCGTCACGCCTCGATCATGTTGGCGCTAGAGGCCACGCTGGAGGCGATGCAAACGGCGCAAAAA
GCAGACTGCGCCTGA

Upstream 100 bases:

>100_bases
CAGGGCACAAGGCCAGCTTCGTTGTATTTGAGCGTCTCGGGCGAGAACTTCACCAAATCGTGCATGTTAAAAACCTTTTG
CATCTCAGGGGCACGCCCCT

Downstream 100 bases:

>100_bases
TCCGGTTGACCTGCAACATCCCACGTTAACAGAAAAAACCGCCGCTCATCCGGGCAGATGGCGGCGGCAAGTGATCGCGC
GGTCATGCGGGACCCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NIFU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; NifU-Like Involved In Fe-S Cluster Formation; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MYEEHGARETQEHDMSGETDLIKLYSTKILALAADIPHLGHLEQADATVKRRSPLCGSTVTVDVTLEDGKVAQFAQDVKA
CALGQAAAAVVGAAIIGRSAAEVERARDQLKAMLTEGGPVPEAPFDGLEVLIPARDFKNRHASIMLALEATLEAMQTAQK
ADCA

Sequences:

>Translated_164_residues
MYEEHGARETQEHDMSGETDLIKLYSTKILALAADIPHLGHLEQADATVKRRSPLCGSTVTVDVTLEDGKVAQFAQDVKA
CALGQAAAAVVGAAIIGRSAAEVERARDQLKAMLTEGGPVPEAPFDGLEVLIPARDFKNRHASIMLALEATLEAMQTAQK
ADCA
>Mature_164_residues
MYEEHGARETQEHDMSGETDLIKLYSTKILALAADIPHLGHLEQADATVKRRSPLCGSTVTVDVTLEDGKVAQFAQDVKA
CALGQAAAAVVGAAIIGRSAAEVERARDQLKAMLTEGGPVPEAPFDGLEVLIPARDFKNRHASIMLALEATLEAMQTAQK
ADCA

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17423; Mature: 17423

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEEHGARETQEHDMSGETDLIKLYSTKILALAADIPHLGHLEQADATVKRRSPLCGSTV
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEE
TVDVTLEDGKVAQFAQDVKACALGQAAAAVVGAAIIGRSAAEVERARDQLKAMLTEGGPV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PEAPFDGLEVLIPARDFKNRHASIMLALEATLEAMQTAQKADCA
CCCCCCCEEEEECCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYEEHGARETQEHDMSGETDLIKLYSTKILALAADIPHLGHLEQADATVKRRSPLCGSTV
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEE
TVDVTLEDGKVAQFAQDVKACALGQAAAAVVGAAIIGRSAAEVERARDQLKAMLTEGGPV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PEAPFDGLEVLIPARDFKNRHASIMLALEATLEAMQTAQKADCA
CCCCCCCEEEEECCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA