| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081191
Identifier: 99081191
GI number: 99081191
Start: 1440838
End: 1441377
Strand: Reverse
Name: 99081191
Synonym: TM1040_1350
Alternate gene names: NA
Gene position: 1441377-1440838 (Counterclockwise)
Preceding gene: 99081194
Following gene: 99081190
Centisome position: 45.03
GC content: 55.19
Gene sequence:
>540_bases TTGGGGAACCCAAACACCTTGGATCTCTTTAGTCTCATCTTCGAGTTGATCGACCTCAGGTCGTTTTCGAACCTTTGGTA CTGGATCGCGCTGGCGGTGCTGTGGTCCTCGGCGAGCCACTGGGTTCTTGGCGTACCCTTTGACATGGTCGCGCGCGCGG CAAAACACGGTGGATCAGCGGCCCAAGATCTCCAGGATGCGGTGCGCATTCAGGTGAACAGGCTTCTTTATATCTCTGAA GTTTCGGGGTTTGCCCTCACTGCTTTTGCGTTTTTTATGATCACCACCTTGGTGCTTTTGGGGTTTTACTACCGCGTCGA ATTTGCACAGGCCGTGGTGCTGATGCTGATACCGATGTATGTCGTCGGCCTAATTAACCTGCGCGCCGCTCGGGCCCTGC GCACGCCGCATGATATTGATGCGCTGCGCAAACGGCTCACACGGGCGCGGGTTCTGATACAGTTGGTCGGCGTTATCTCG ATATTTGTCACCGCCCTTTGGGGAATGTATCAGAACCTCACTTTTGGCGCGCTCGGCTAA
Upstream 100 bases:
>100_bases GTCTCCGATCCGCGCATTTCTGACGCAGCAGCACTTGTGTCGCAGAGCGTGGCGATGGATACAGGGCAGGCAGCGCGCAG GGCGTCTTTTGTTTACTCTC
Downstream 100 bases:
>100_bases AGAGCCAACAGGATCTACTAAGGAACGCTTATGTCACAGCAATCCGTCGTAATGGGGGGCGCACCCGAGGGGTATGACGC GCGCCTGGTTCTGAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGNPNTLDLFSLIFELIDLRSFSNLWYWIALAVLWSSASHWVLGVPFDMVARAAKHGGSAAQDLQDAVRIQVNRLLYISE VSGFALTAFAFFMITTLVLLGFYYRVEFAQAVVLMLIPMYVVGLINLRAARALRTPHDIDALRKRLTRARVLIQLVGVIS IFVTALWGMYQNLTFGALG
Sequences:
>Translated_179_residues MGNPNTLDLFSLIFELIDLRSFSNLWYWIALAVLWSSASHWVLGVPFDMVARAAKHGGSAAQDLQDAVRIQVNRLLYISE VSGFALTAFAFFMITTLVLLGFYYRVEFAQAVVLMLIPMYVVGLINLRAARALRTPHDIDALRKRLTRARVLIQLVGVIS IFVTALWGMYQNLTFGALG >Mature_178_residues GNPNTLDLFSLIFELIDLRSFSNLWYWIALAVLWSSASHWVLGVPFDMVARAAKHGGSAAQDLQDAVRIQVNRLLYISEV SGFALTAFAFFMITTLVLLGFYYRVEFAQAVVLMLIPMYVVGLINLRAARALRTPHDIDALRKRLTRARVLIQLVGVISI FVTALWGMYQNLTFGALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20070; Mature: 19939
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPNTLDLFSLIFELIDLRSFSNLWYWIALAVLWSSASHWVLGVPFDMVARAAKHGGSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCH AQDLQDAVRIQVNRLLYISEVSGFALTAFAFFMITTLVLLGFYYRVEFAQAVVLMLIPMY HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGLINLRAARALRTPHDIDALRKRLTRARVLIQLVGVISIFVTALWGMYQNLTFGALG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GNPNTLDLFSLIFELIDLRSFSNLWYWIALAVLWSSASHWVLGVPFDMVARAAKHGGSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCH AQDLQDAVRIQVNRLLYISEVSGFALTAFAFFMITTLVLLGFYYRVEFAQAVVLMLIPMY HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGLINLRAARALRTPHDIDALRKRLTRARVLIQLVGVISIFVTALWGMYQNLTFGALG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA