| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081160
Identifier: 99081160
GI number: 99081160
Start: 1405184
End: 1405507
Strand: Reverse
Name: 99081160
Synonym: TM1040_1319
Alternate gene names: NA
Gene position: 1405507-1405184 (Counterclockwise)
Preceding gene: 99081162
Following gene: 99081158
Centisome position: 43.91
GC content: 59.88
Gene sequence:
>324_bases ATGAGCCGCCAGCGTCTAACCCTGATTGTGAACAATGATCTACCATGCGGTCATGATGCGCGTGGCGCTGGGCAAAAGTC TTGGTCAAATCAGTTTGACCCGCACGCCCTAAAGGTCAGCGCGCCTGATCTTTGGTCGTCATACTTCCGTACCCGGTTCC ACAGCCCGCGCGAGGTCGCGCTGTTCTGCGATGTATCGTTTCAGACCGCGCTGAACTGGTGGGGCGCCGTCACAGCGCCA GCCAGCCATATCGCTTTGCTCGTCATGCTGACCGACCCCGGCGCGCCTGAGTTTTTCGGTCAGGCGTTGGAGGTAGCGGC GTGA
Upstream 100 bases:
>100_bases GGAAGGCAGGACGGTCCAGCCCGACGCTGCACACCGTGGACAAGATCCGCCGCTATATGGCCGACAATCCCGCACCTGCG GACTCGCCGGAGGCAGCCGC
Downstream 100 bases:
>100_bases ATATGGCTCACAAAAGCAAGAGAAATCAGCACCCACTAGTCCTTACTTGGGTCCCAATCATAGTTGAGCGCGTGACCATC CTCACATGTGATCGTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSRQRLTLIVNNDLPCGHDARGAGQKSWSNQFDPHALKVSAPDLWSSYFRTRFHSPREVALFCDVSFQTALNWWGAVTAP ASHIALLVMLTDPGAPEFFGQALEVAA
Sequences:
>Translated_107_residues MSRQRLTLIVNNDLPCGHDARGAGQKSWSNQFDPHALKVSAPDLWSSYFRTRFHSPREVALFCDVSFQTALNWWGAVTAP ASHIALLVMLTDPGAPEFFGQALEVAA >Mature_106_residues SRQRLTLIVNNDLPCGHDARGAGQKSWSNQFDPHALKVSAPDLWSSYFRTRFHSPREVALFCDVSFQTALNWWGAVTAPA SHIALLVMLTDPGAPEFFGQALEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11813; Mature: 11682
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQRLTLIVNNDLPCGHDARGAGQKSWSNQFDPHALKVSAPDLWSSYFRTRFHSPREVA CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEE LFCDVSFQTALNWWGAVTAPASHIALLVMLTDPGAPEFFGQALEVAA EEECCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure SRQRLTLIVNNDLPCGHDARGAGQKSWSNQFDPHALKVSAPDLWSSYFRTRFHSPREVA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEE LFCDVSFQTALNWWGAVTAPASHIALLVMLTDPGAPEFFGQALEVAA EEECCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA