| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081152
Identifier: 99081152
GI number: 99081152
Start: 1400970
End: 1401371
Strand: Reverse
Name: 99081152
Synonym: TM1040_1311
Alternate gene names: NA
Gene position: 1401371-1400970 (Counterclockwise)
Preceding gene: 99081153
Following gene: 99081151
Centisome position: 43.78
GC content: 61.19
Gene sequence:
>402_bases ATGACAGCCGAGGAATATCGGGACGCCCATCAGGCCACCACCGTCGAGGACCGGCGCCGGGTGCGCGGCACGAAGCGCAC GACTACCGCCGACGGGATCACTCACGACAGCAAGACCGAGGCTGAGCGTTGGGAAGAATTGAAGCTGCTACAGGCGGCGG GCGAGATCTGCGGCTTGCGGCGTCAGGTCGAGATCGGGCTGATCGGGCGAGACGGGCCGATCATGACCGACGGCGGGGCC AAGCAGCGCGTCTATCGCGCAGATTTTGTTTATGTCGACAATCGCCTCGGCGTGACTGTGATCGAGGATCGCAAAGGCCA TGAAACGGAAGCGTTCAAGCTTAAGAAAGCGATTTTGGCCGCACAAGGCATGGAGATCCTAGTCACGCGAGCAAAGGGCT AA
Upstream 100 bases:
>100_bases GGGTTCAGACGATCTCTCTCGCGCAGTTCTTCGAACAAGATCTGCGAGAGCGGATGGAGGCAGAAGCCAAAGAGAGAAGG GGGACGCAGTGACAGAACGC
Downstream 100 bases:
>100_bases GTCATGGGCGTAGTCGAGGACCTGAAACACGAGGTGGCGAACCTGCGCAAACTGCTCGATCAGGCGCAGCGCTCCGGGCA GCGCAAAGCCTCGGCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTAEEYRDAHQATTVEDRRRVRGTKRTTTADGITHDSKTEAERWEELKLLQAAGEICGLRRQVEIGLIGRDGPIMTDGGA KQRVYRADFVYVDNRLGVTVIEDRKGHETEAFKLKKAILAAQGMEILVTRAKG
Sequences:
>Translated_133_residues MTAEEYRDAHQATTVEDRRRVRGTKRTTTADGITHDSKTEAERWEELKLLQAAGEICGLRRQVEIGLIGRDGPIMTDGGA KQRVYRADFVYVDNRLGVTVIEDRKGHETEAFKLKKAILAAQGMEILVTRAKG >Mature_132_residues TAEEYRDAHQATTVEDRRRVRGTKRTTTADGITHDSKTEAERWEELKLLQAAGEICGLRRQVEIGLIGRDGPIMTDGGAK QRVYRADFVYVDNRLGVTVIEDRKGHETEAFKLKKAILAAQGMEILVTRAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14913; Mature: 14782
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEEYRDAHQATTVEDRRRVRGTKRTTTADGITHDSKTEAERWEELKLLQAAGEICGLR CCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC RQVEIGLIGRDGPIMTDGGAKQRVYRADFVYVDNRLGVTVIEDRKGHETEAFKLKKAILA EEEEEEEEECCCCEEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH AQGMEILVTRAKG HCCCEEEEEECCC >Mature Secondary Structure TAEEYRDAHQATTVEDRRRVRGTKRTTTADGITHDSKTEAERWEELKLLQAAGEICGLR CHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC RQVEIGLIGRDGPIMTDGGAKQRVYRADFVYVDNRLGVTVIEDRKGHETEAFKLKKAILA EEEEEEEEECCCCEEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH AQGMEILVTRAKG HCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA