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The map label for this gene is arrD [H]

Identifier: 99081146

GI number: 99081146

Start: 1397338

End: 1397748

Strand: Reverse

Name: arrD [H]

Synonym: TM1040_1305

Alternate gene names: 99081146

Gene position: 1397748-1397338 (Counterclockwise)

Preceding gene: 99081147

Following gene: 99081145

Centisome position: 43.67

GC content: 60.1

Gene sequence:

>411_bases
GTGGCCAAGTGGGAAGGTGTGCGGCTTGAGGCCTACCGCGATATCGTGGGTGTGCCGACGATCTGTTTCGGCGATACTCA
CGGCGTTCAGATCGGTGACACTGCGACTATGGCTGAATGCGTCGACCGGCTCGAGAAAGATGTGCGTGCATTTTATTCCG
AGATCCGTCCTTGCATGACGAACCCGAATATTCCGGCAGGTGTTCAGGCCTCCATGCTAGAGCTTGCATACAATGTTGGG
TCTGGCCCGGTTTGTCGGTCGACGATGATGCGCCTTGCAAACGCTGGTAAGCACCGGGCCGCGTGCGATGAACTGCGCCG
CTGGGTGATCGCGGGTGGCAAACGGGTGCGCGGGCTAGCCAATCGCCGGGCCGATAGCAAGCGAACGCTGTGCCTCAAGG
GGCTGACCTGA

Upstream 100 bases:

>100_bases
ATTGTCCGAGTTCTGGCAAGACACATCGGGTGCGGCCAGTACGAGGTTTGTAAAGGGCGTCGGCGCTGGTGCGCTTGTGA
TTGCTCTAGCATCGCCATTT

Downstream 100 bases:

>100_bases
TGCCGCTGCTGCCTCTCCTGCTGATCTGTGCGGCTTTGGCGTCCTGCGCGAAGGTTGCGGGTCTCGTCGGCGGGGCGCTG
GGTGGCGGGCCCAGCGTGGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAKWEGVRLEAYRDIVGVPTICFGDTHGVQIGDTATMAECVDRLEKDVRAFYSEIRPCMTNPNIPAGVQASMLELAYNVG
SGPVCRSTMMRLANAGKHRAACDELRRWVIAGGKRVRGLANRRADSKRTLCLKGLT

Sequences:

>Translated_136_residues
MAKWEGVRLEAYRDIVGVPTICFGDTHGVQIGDTATMAECVDRLEKDVRAFYSEIRPCMTNPNIPAGVQASMLELAYNVG
SGPVCRSTMMRLANAGKHRAACDELRRWVIAGGKRVRGLANRRADSKRTLCLKGLT
>Mature_135_residues
AKWEGVRLEAYRDIVGVPTICFGDTHGVQIGDTATMAECVDRLEKDVRAFYSEIRPCMTNPNIPAGVQASMLELAYNVGS
GPVCRSTMMRLANAGKHRAACDELRRWVIAGGKRVRGLANRRADSKRTLCLKGLT

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=131, Percent_Identity=41.9847328244275, Blast_Score=99, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 14942; Mature: 14810

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWEGVRLEAYRDIVGVPTICFGDTHGVQIGDTATMAECVDRLEKDVRAFYSEIRPCMT
CCCCCCCHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPNIPAGVQASMLELAYNVGSGPVCRSTMMRLANAGKHRAACDELRRWVIAGGKRVRGLA
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
NRRADSKRTLCLKGLT
HHCCCCCCEEEECCCC
>Mature Secondary Structure 
AKWEGVRLEAYRDIVGVPTICFGDTHGVQIGDTATMAECVDRLEKDVRAFYSEIRPCMT
CCCCCCHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPNIPAGVQASMLELAYNVGSGPVCRSTMMRLANAGKHRAACDELRRWVIAGGKRVRGLA
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
NRRADSKRTLCLKGLT
HHCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]