Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081145

Identifier: 99081145

GI number: 99081145

Start: 1396955

End: 1397338

Strand: Reverse

Name: 99081145

Synonym: TM1040_1304

Alternate gene names: NA

Gene position: 1397338-1396955 (Counterclockwise)

Preceding gene: 99081146

Following gene: 99081144

Centisome position: 43.65

GC content: 66.67

Gene sequence:

>384_bases
ATGCCGCTGCTGCCTCTCCTGCTGATCTGTGCGGCTTTGGCGTCCTGCGCGAAGGTTGCGGGTCTCGTCGGCGGGGCGCT
GGGTGGCGGGCCCAGCGTGGCGGCGAACGTCCAGGCAGGCCGTAACAATGCCCAGACCGTCGGGCAGGCGACGTTCAGCG
ATCAGAGGATCGAGGACGTGCAGGCGCGCAGCGTAGAACTGAGCGCAGGCGATACGCGGGTCAGGAGTGAGAACGTCGAG
ACGGTGATCGTTCGCGAAGATCCGCCTGCATGGTTGCTTCTGGTGGCCCTTGTCGGCTGGCTGCTGCCAACACCGCAGCA
GATGGGCGGAGCGCTGTTCGGCATTATCGCCAGGCCTTTTCGCGGGTCCTTCCCCGGGGGGTGA

Upstream 100 bases:

>100_bases
AACTGCGCCGCTGGGTGATCGCGGGTGGCAAACGGGTGCGCGGGCTAGCCAATCGCCGGGCCGATAGCAAGCGAACGCTG
TGCCTCAAGGGGCTGACCTG

Downstream 100 bases:

>100_bases
CGTCTGTGGGTGTGCCTATGCGCCGAAATTTATGTGTGCGTGCCGCCGGGCGAAGGGGTTGTTTATTATATAGATCGCGC
AACTCCCTGATGAATTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MPLLPLLLICAALASCAKVAGLVGGALGGGPSVAANVQAGRNNAQTVGQATFSDQRIEDVQARSVELSAGDTRVRSENVE
TVIVREDPPAWLLLVALVGWLLPTPQQMGGALFGIIARPFRGSFPGG

Sequences:

>Translated_127_residues
MPLLPLLLICAALASCAKVAGLVGGALGGGPSVAANVQAGRNNAQTVGQATFSDQRIEDVQARSVELSAGDTRVRSENVE
TVIVREDPPAWLLLVALVGWLLPTPQQMGGALFGIIARPFRGSFPGG
>Mature_126_residues
PLLPLLLICAALASCAKVAGLVGGALGGGPSVAANVQAGRNNAQTVGQATFSDQRIEDVQARSVELSAGDTRVRSENVET
VIVREDPPAWLLLVALVGWLLPTPQQMGGALFGIIARPFRGSFPGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13060; Mature: 12929

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLPLLLICAALASCAKVAGLVGGALGGGPSVAANVQAGRNNAQTVGQATFSDQRIEDV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHH
QARSVELSAGDTRVRSENVETVIVREDPPAWLLLVALVGWLLPTPQQMGGALFGIIARPF
HHHEEECCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
RGSFPGG
CCCCCCC
>Mature Secondary Structure 
PLLPLLLICAALASCAKVAGLVGGALGGGPSVAANVQAGRNNAQTVGQATFSDQRIEDV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHH
QARSVELSAGDTRVRSENVETVIVREDPPAWLLLVALVGWLLPTPQQMGGALFGIIARPF
HHHEEECCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
RGSFPGG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA