Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081120

Identifier: 99081120

GI number: 99081120

Start: 1377646

End: 1377864

Strand: Reverse

Name: 99081120

Synonym: TM1040_1279

Alternate gene names: NA

Gene position: 1377864-1377646 (Counterclockwise)

Preceding gene: 99081121

Following gene: 99081119

Centisome position: 43.05

GC content: 57.99

Gene sequence:

>219_bases
GTGGACTCCGCAGTCTTCTACCATTCTAAGGAAGGTGAGGCCCTCGATGAGATTGTCTGGCGCCACTACCGCGCAGAGAT
CCGGGGCGCGTTCGAAACGGTGCTCGAAGCAAATCCGGGTATCGCTGCAATGGGGCCGATCCTGCCGCTGGGAACTCGGG
TTAAACTCCCCGTGATCGATACACCCAAAGAAGCAGAAAGCCTGCGCCTATGGGATTGA

Upstream 100 bases:

>100_bases
GTTTGGGTGGTCAAAAGTGTGCGAGAGGGCCAACGGACCTTTACGCACCATGGCGCGCCACTGTGGCAAGAATTTGGGAT
CAGTATTCGGAGGTACGACG

Downstream 100 bases:

>100_bases
TGGATTTCAGACCGTACTTTCGAGTCACTGTTGACGGCAAAGATATCAGTGGCGTTCTTGCGCCGCGGCTGGTGAGCTTA
CGTGTGACGGATGGCGCAGG

Product: phage tail X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD

Sequences:

>Translated_72_residues
MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD
>Mature_72_residues
MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD

Specific function: Unknown

COG id: COG5004

COG function: function code R; P2-like prophage tail protein X

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8078; Mature: 8078

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVID
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
TPKEAESLRLWD
CCCCCCCEECCC
>Mature Secondary Structure
MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVID
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
TPKEAESLRLWD
CCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA