| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081120
Identifier: 99081120
GI number: 99081120
Start: 1377646
End: 1377864
Strand: Reverse
Name: 99081120
Synonym: TM1040_1279
Alternate gene names: NA
Gene position: 1377864-1377646 (Counterclockwise)
Preceding gene: 99081121
Following gene: 99081119
Centisome position: 43.05
GC content: 57.99
Gene sequence:
>219_bases GTGGACTCCGCAGTCTTCTACCATTCTAAGGAAGGTGAGGCCCTCGATGAGATTGTCTGGCGCCACTACCGCGCAGAGAT CCGGGGCGCGTTCGAAACGGTGCTCGAAGCAAATCCGGGTATCGCTGCAATGGGGCCGATCCTGCCGCTGGGAACTCGGG TTAAACTCCCCGTGATCGATACACCCAAAGAAGCAGAAAGCCTGCGCCTATGGGATTGA
Upstream 100 bases:
>100_bases GTTTGGGTGGTCAAAAGTGTGCGAGAGGGCCAACGGACCTTTACGCACCATGGCGCGCCACTGTGGCAAGAATTTGGGAT CAGTATTCGGAGGTACGACG
Downstream 100 bases:
>100_bases TGGATTTCAGACCGTACTTTCGAGTCACTGTTGACGGCAAAGATATCAGTGGCGTTCTTGCGCCGCGGCTGGTGAGCTTA CGTGTGACGGATGGCGCAGG
Product: phage tail X
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD
Sequences:
>Translated_72_residues MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD >Mature_72_residues MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVIDTPKEAESLRLWD
Specific function: Unknown
COG id: COG5004
COG function: function code R; P2-like prophage tail protein X
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8078; Mature: 8078
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVID CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC TPKEAESLRLWD CCCCCCCEECCC >Mature Secondary Structure MDSAVFYHSKEGEALDEIVWRHYRAEIRGAFETVLEANPGIAAMGPILPLGTRVKLPVID CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC TPKEAESLRLWD CCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA