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The map label for this gene is yliI [H]

Identifier: 99081112

GI number: 99081112

Start: 1369443

End: 1370549

Strand: Reverse

Name: yliI [H]

Synonym: TM1040_1271

Alternate gene names: 99081112

Gene position: 1370549-1369443 (Counterclockwise)

Preceding gene: 99081118

Following gene: 99081110

Centisome position: 42.82

GC content: 62.33

Gene sequence:

>1107_bases
ATGCTACGCCCGCTCGCCGTGATCGCCAGTTTGATGTTTAGTGCCGCGATGGCCGTGCCCTCGCTGGCGCAGCAAATGGA
CTCAAGCCAAGGCACGCTCCGCGTTGAAAAAATGGCCGATGGGTTTGATGTTCCTTGGGGTTTTACGTTTTTGCCCGGAC
GCGCACTGCTGGTCACGGAGCGCTCCGGACAGCTTTGGTATCTGAACGGCGCGCGACGCCAACAGGTCGATGGCGTCCCT
GAGATCGCTGCGGACGGGCAGGGTGGCCTTCTGGACGTTGTTGCCGCGCGGGATTTCGTTCAGAGCCGCACCGTATATCT
CACGTTTGCCCGTCCGCAGGGGCGCGGCGCGGGGACCGCTGTGGCACGGGCTGAACTCTCTGAAGACGGCAGCCGATTCG
ACTCGCTTGAGGTGATTTTTGAAGCCACGCCAGGCGCGCGGGGCGGGCGGCACTTTGGCTCGCGGCTGGTCGAAGCCCCC
GACGGCAGTCTTTATGTCAGCCTCGGAGAACGTGGTGACCGTCCCAGCGCACAGGATCTGTCACGCGAGCAGGGTTCGAT
TATTCGCATCCTTCCGGATGGCAGCATTCCCTCGGACAATCCTTTTGTAAATTCTGAGGACGCGCGTCCGGCGATCTGGT
CCTACGGCCACCGCAACCCGCAGGGCATGGCGCTTGATGCGGCCGGCGACATCTGGGCCGTTGAACATGGCGCGCGCGGC
GGCGATGAGATCAACCGGATCACACGGGGCGCCAACTATGGTTGGCCGGTCATTTCCTACGGGCGCCACTATTCGGGGCT
GAAGATCGGCGAGGGCACCGAAAAGCCGGGGCTGCAACAGCCGGAGTGGTATTGGGATCCCTCCATCGCGCCCTCGGGTA
TGATGATCTACTCGGGCAAGCTCTGGCCCAACTGGCGCGGAGACATCTTTGTGGGATCCCTGAAATTTGATTACATCTCA
AGGCTCTCGGGGGCACCCCTGCAGGAGGTCGAGCAGATGAAATCGCCCGAAACCGCAAGGGTGCGCGATATCCGCGAAGC
CCCCGATGGCAGCATCTGGTTTGCCTCGGAATACGAGGGCGCCCTCTTTCGGATCACCCCGAACTGA

Upstream 100 bases:

>100_bases
ACCCTATGCAAGCCCCGCAAGAAAGGGAAGAGCGATCGGACAGGCTTTTTGTTACGTCACAATGTCTGCGCTAACATCCC
ACTGTCAAAGGAGAAAGCTG

Downstream 100 bases:

>100_bases
GCAAACTCAGGTGATGTGGCGTACGCCCTTGCTGCCACGCTCTCGATAGGGCGTGGTGTCGTAATGAGCGCGGTAGCATT
TGGAGAAATGCGACGGCGAT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MLRPLAVIASLMFSAAMAVPSLAQQMDSSQGTLRVEKMADGFDVPWGFTFLPGRALLVTERSGQLWYLNGARRQQVDGVP
EIAADGQGGLLDVVAARDFVQSRTVYLTFARPQGRGAGTAVARAELSEDGSRFDSLEVIFEATPGARGGRHFGSRLVEAP
DGSLYVSLGERGDRPSAQDLSREQGSIIRILPDGSIPSDNPFVNSEDARPAIWSYGHRNPQGMALDAAGDIWAVEHGARG
GDEINRITRGANYGWPVISYGRHYSGLKIGEGTEKPGLQQPEWYWDPSIAPSGMMIYSGKLWPNWRGDIFVGSLKFDYIS
RLSGAPLQEVEQMKSPETARVRDIREAPDGSIWFASEYEGALFRITPN

Sequences:

>Translated_368_residues
MLRPLAVIASLMFSAAMAVPSLAQQMDSSQGTLRVEKMADGFDVPWGFTFLPGRALLVTERSGQLWYLNGARRQQVDGVP
EIAADGQGGLLDVVAARDFVQSRTVYLTFARPQGRGAGTAVARAELSEDGSRFDSLEVIFEATPGARGGRHFGSRLVEAP
DGSLYVSLGERGDRPSAQDLSREQGSIIRILPDGSIPSDNPFVNSEDARPAIWSYGHRNPQGMALDAAGDIWAVEHGARG
GDEINRITRGANYGWPVISYGRHYSGLKIGEGTEKPGLQQPEWYWDPSIAPSGMMIYSGKLWPNWRGDIFVGSLKFDYIS
RLSGAPLQEVEQMKSPETARVRDIREAPDGSIWFASEYEGALFRITPN
>Mature_368_residues
MLRPLAVIASLMFSAAMAVPSLAQQMDSSQGTLRVEKMADGFDVPWGFTFLPGRALLVTERSGQLWYLNGARRQQVDGVP
EIAADGQGGLLDVVAARDFVQSRTVYLTFARPQGRGAGTAVARAELSEDGSRFDSLEVIFEATPGARGGRHFGSRLVEAP
DGSLYVSLGERGDRPSAQDLSREQGSIIRILPDGSIPSDNPFVNSEDARPAIWSYGHRNPQGMALDAAGDIWAVEHGARG
GDEINRITRGANYGWPVISYGRHYSGLKIGEGTEKPGLQQPEWYWDPSIAPSGMMIYSGKLWPNWRGDIFVGSLKFDYIS
RLSGAPLQEVEQMKSPETARVRDIREAPDGSIWFASEYEGALFRITPN

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=357, Percent_Identity=40.8963585434174, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 40195; Mature: 40195

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPLAVIASLMFSAAMAVPSLAQQMDSSQGTLRVEKMADGFDVPWGFTFLPGRALLVTE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEE
RSGQLWYLNGARRQQVDGVPEIAADGQGGLLDVVAARDFVQSRTVYLTFARPQGRGAGTA
CCCCEEEECCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCCHH
VARAELSEDGSRFDSLEVIFEATPGARGGRHFGSRLVEAPDGSLYVSLGERGDRPSAQDL
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHEECCCCCEEEEECCCCCCCCHHHH
SREQGSIIRILPDGSIPSDNPFVNSEDARPAIWSYGHRNPQGMALDAAGDIWAVEHGARG
HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCC
GDEINRITRGANYGWPVISYGRHYSGLKIGEGTEKPGLQQPEWYWDPSIAPSGMMIYSGK
CHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCEEEEECC
LWPNWRGDIFVGSLKFDYISRLSGAPLQEVEQMKSPETARVRDIREAPDGSIWFASEYEG
CCCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCC
ALFRITPN
EEEEECCC
>Mature Secondary Structure
MLRPLAVIASLMFSAAMAVPSLAQQMDSSQGTLRVEKMADGFDVPWGFTFLPGRALLVTE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEE
RSGQLWYLNGARRQQVDGVPEIAADGQGGLLDVVAARDFVQSRTVYLTFARPQGRGAGTA
CCCCEEEECCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCCHH
VARAELSEDGSRFDSLEVIFEATPGARGGRHFGSRLVEAPDGSLYVSLGERGDRPSAQDL
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHEECCCCCEEEEECCCCCCCCHHHH
SREQGSIIRILPDGSIPSDNPFVNSEDARPAIWSYGHRNPQGMALDAAGDIWAVEHGARG
HHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCC
GDEINRITRGANYGWPVISYGRHYSGLKIGEGTEKPGLQQPEWYWDPSIAPSGMMIYSGK
CHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCEEEEECC
LWPNWRGDIFVGSLKFDYISRLSGAPLQEVEQMKSPETARVRDIREAPDGSIWFASEYEG
CCCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCC
ALFRITPN
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]