The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is bcsP31 [H]

Identifier: 99081093

GI number: 99081093

Start: 1347286

End: 1348257

Strand: Reverse

Name: bcsP31 [H]

Synonym: TM1040_1252

Alternate gene names: 99081093

Gene position: 1348257-1347286 (Counterclockwise)

Preceding gene: 99081094

Following gene: 99081092

Centisome position: 42.12

GC content: 60.7

Gene sequence:

>972_bases
ATGGTCCTCAAGCACACACTTCTTGCATCTGCTGCAACTGTTGCGCTCGGCTTTGCCGGGGCGGCGTCCGCGGCTGAACA
GCAGTTCATCACCATCGGCACCGGTGGCGTGACCGGCGTTTACTACCCTACGGGTGGCGCGATCTGCCGTCTGGTGAACA
AAGACCGCAAAGAGCACGGCATTCGCTGCTCCGTGGAATCCACCGGTGGTTCCGTTTACAACACCCGCACCATCCGTGAA
GGCGAGCTGGAGTTCGGCGTTGTCCAGTCCGACGTTCAGAAGGCTGGTCTCGACGGCACCGGCGCATTTGAAGCAGACGG
CCCGTTCGAAGGTCTGCGCGCTCTGTTCTCGGTCCACCCGGAGCCGATGCACCTGATGGCGCGCAAGGATGCGGAAATCG
CCTCCGTCGACGATCTGAAGGGCAAGAAAGTCAACATCGCGAACCCCGGCTCCGGGACCCGCGTTCTGGCCGAAACCCTG
ATGAAATACTCCGGTCTGACCACCGATGATTTTGCGCTGGCAGCAGAGCTGAAGTCCTCCGAGCAGGCCGCGGCGCTGTG
CGACGGCAAGATCGACGCAACCATCTGGGCCTCCGGTCTGCCGAATGGTTCGAGCCAGGAAGCGACCTCGTCCTGTGACG
TGAACATCGTTCCGCTGTCCGGTGAAAACATTGACACTCTGCTGGCAGAGAACACGCCGTACGCAGCCGCAACCATCCCC
GGTGGCATGTATCCGGGTAACCCGGACGACATTCCGTCCTGGGGCCCCAAAGCAACCTTCGTGACCTCCGCTGACGTCTC
CGACGAGGTGGTCTACGCTGTTGTAAGCGCGGTCTTCGAAAACTTCGACGACTTCAAAAAGCTGCATCCGGCTTTCTCCC
GTCTCTCCGAAGAAGAGATGGTGAGCGACGCACTGTCGGCTGAAATCCACCCCGGCGCGATGAAGTACTACAAAGAGCGC
GGCTGGAAGTGA

Upstream 100 bases:

>100_bases
CATTAGTTATGTCGTGACTGCAAAAATAACTTGTGGAAGCATCGCGCGCATACTATCGGCACCGCGACCGATTTTAGGTT
TTAAATCAGGGAGAGTACTT

Downstream 100 bases:

>100_bases
TCCAATCACTTCTTTCGTGAAATCAAAGGCTTTCGCCCCTTTCTTTAAGGGGCGGGAGCCGTTTTCGTTTCAACAAGAGT
GCATAACAAACCGGGTGGGG

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVLKHTLLASAATVALGFAGAASAAEQQFITIGTGGVTGVYYPTGGAICRLVNKDRKEHGIRCSVESTGGSVYNTRTIRE
GELEFGVVQSDVQKAGLDGTGAFEADGPFEGLRALFSVHPEPMHLMARKDAEIASVDDLKGKKVNIANPGSGTRVLAETL
MKYSGLTTDDFALAAELKSSEQAAALCDGKIDATIWASGLPNGSSQEATSSCDVNIVPLSGENIDTLLAENTPYAAATIP
GGMYPGNPDDIPSWGPKATFVTSADVSDEVVYAVVSAVFENFDDFKKLHPAFSRLSEEEMVSDALSAEIHPGAMKYYKER
GWK

Sequences:

>Translated_323_residues
MVLKHTLLASAATVALGFAGAASAAEQQFITIGTGGVTGVYYPTGGAICRLVNKDRKEHGIRCSVESTGGSVYNTRTIRE
GELEFGVVQSDVQKAGLDGTGAFEADGPFEGLRALFSVHPEPMHLMARKDAEIASVDDLKGKKVNIANPGSGTRVLAETL
MKYSGLTTDDFALAAELKSSEQAAALCDGKIDATIWASGLPNGSSQEATSSCDVNIVPLSGENIDTLLAENTPYAAATIP
GGMYPGNPDDIPSWGPKATFVTSADVSDEVVYAVVSAVFENFDDFKKLHPAFSRLSEEEMVSDALSAEIHPGAMKYYKER
GWK
>Mature_323_residues
MVLKHTLLASAATVALGFAGAASAAEQQFITIGTGGVTGVYYPTGGAICRLVNKDRKEHGIRCSVESTGGSVYNTRTIRE
GELEFGVVQSDVQKAGLDGTGAFEADGPFEGLRALFSVHPEPMHLMARKDAEIASVDDLKGKKVNIANPGSGTRVLAETL
MKYSGLTTDDFALAAELKSSEQAAALCDGKIDATIWASGLPNGSSQEATSSCDVNIVPLSGENIDTLLAENTPYAAATIP
GGMYPGNPDDIPSWGPKATFVTSADVSDEVVYAVVSAVFENFDDFKKLHPAFSRLSEEEMVSDALSAEIHPGAMKYYKER
GWK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168
- InterPro:   IPR011852 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 34079; Mature: 34079

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKHTLLASAATVALGFAGAASAAEQQFITIGTGGVTGVYYPTGGAICRLVNKDRKEHG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCC
IRCSVESTGGSVYNTRTIREGELEFGVVQSDVQKAGLDGTGAFEADGPFEGLRALFSVHP
CEEEEECCCCCEEEECEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
EPMHLMARKDAEIASVDDLKGKKVNIANPGSGTRVLAETLMKYSGLTTDDFALAAELKSS
CHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
EQAAALCDGKIDATIWASGLPNGSSQEATSSCDVNIVPLSGENIDTLLAENTPYAAATIP
CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHEEECCCCCEEEECC
GGMYPGNPDDIPSWGPKATFVTSADVSDEVVYAVVSAVFENFDDFKKLHPAFSRLSEEEM
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
VSDALSAEIHPGAMKYYKERGWK
HHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVLKHTLLASAATVALGFAGAASAAEQQFITIGTGGVTGVYYPTGGAICRLVNKDRKEHG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCC
IRCSVESTGGSVYNTRTIREGELEFGVVQSDVQKAGLDGTGAFEADGPFEGLRALFSVHP
CEEEEECCCCCEEEECEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
EPMHLMARKDAEIASVDDLKGKKVNIANPGSGTRVLAETLMKYSGLTTDDFALAAELKSS
CHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
EQAAALCDGKIDATIWASGLPNGSSQEATSSCDVNIVPLSGENIDTLLAENTPYAAATIP
CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHEEECCCCCEEEECC
GGMYPGNPDDIPSWGPKATFVTSADVSDEVVYAVVSAVFENFDDFKKLHPAFSRLSEEEM
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
VSDALSAEIHPGAMKYYKERGWK
HHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3133283 [H]