The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99081080

Identifier: 99081080

GI number: 99081080

Start: 1334517

End: 1335170

Strand: Reverse

Name: 99081080

Synonym: TM1040_1239

Alternate gene names: NA

Gene position: 1335170-1334517 (Counterclockwise)

Preceding gene: 99081091

Following gene: 99081079

Centisome position: 41.71

GC content: 58.1

Gene sequence:

>654_bases
ATGCCTGAGGTCATTTTCCCCGGACCCGAAGGACGCCTGGAAGGCCGTTATCACCCGCAAAAGGAAAAGGATGCGCCGAT
CGCGATCGTGTTGCACCCGCATCCGCAGTTCGGCGGCACAATGAACAACAAGGTGGTCTACAACCTCCATTATGCCTTCT
ACAACATGGGCTTTACCGTTTTGCGGTTCAATTTCCGTGGTGTGGGTCGCTCGCAAGGCGAATATGATCAAGGGGTGGGC
GAACTCTCGGATGCCGCCTCCGCGCTGGATTATCTGCAGTCGATGAACAACAACTCCAAGCACTGCTGGGTTGCGGGATT
CTCCTTTGGGGCCTGGATCGGCATGCAGCTGCTGATGCGCCGTCCGGAGATCACCGGATTTATCTCTGTCGCGCCGCCTG
CCAATATGTATGATTTCTCCTTCCTGGCGCCCTGCCCGTCTTCTGGTCTGATCATCAACGGCACCGCCGACCGCGTGGCG
CCGCCTGCGGACACCGTGGGGCTGGTGAACAAGCTGCACGAGCAGAAGGGCATCACCATCACCCACGAAGAAGTCGAAGG
CGCGGATCATTTCTTCCAGGAGCCGCATATGGACACGATGATCGGCAGCGTGACCGATTATGTGAAGCGACGCCTGACAG
AGAACACCCGCTGA

Upstream 100 bases:

>100_bases
CACCTGCGCCTCTTTAGAACAGTTCTAAGGTGCCGGATAAAATTCGTCAAGTATTTGTCTCCGCCACCTCGCCAAGAAGC
AGAGTAGGATTAACCCACCC

Downstream 100 bases:

>100_bases
TGGGGACGCTGGACACACTGGCTGCAAAGCTGGCGGAGGACACCCTCAAGGTCCAAGATGCGCTCGGCGAAGATCGCATC
TACATGGAGATCGCCCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNMGFTVLRFNFRGVGRSQGEYDQGVG
ELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANMYDFSFLAPCPSSGLIINGTADRVA
PPADTVGLVNKLHEQKGITITHEEVEGADHFFQEPHMDTMIGSVTDYVKRRLTENTR

Sequences:

>Translated_217_residues
MPEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNMGFTVLRFNFRGVGRSQGEYDQGVG
ELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANMYDFSFLAPCPSSGLIINGTADRVA
PPADTVGLVNKLHEQKGITITHEEVEGADHFFQEPHMDTMIGSVTDYVKRRLTENTR
>Mature_216_residues
PEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNMGFTVLRFNFRGVGRSQGEYDQGVGE
LSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANMYDFSFLAPCPSSGLIINGTADRVAP
PADTVGLVNKLHEQKGITITHEEVEGADHFFQEPHMDTMIGSVTDYVKRRLTENTR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 24177; Mature: 24046

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNMGFTV
CCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCEEE
LRFNFRGVGRSQGEYDQGVGELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
RPEITGFISVAPPANMYDFSFLAPCPSSGLIINGTADRVAPPADTVGLVNKLHEQKGITI
CCCCCEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEE
THEEVEGADHFFQEPHMDTMIGSVTDYVKRRLTENTR
EHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNMGFTV
CCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCEEE
LRFNFRGVGRSQGEYDQGVGELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
RPEITGFISVAPPANMYDFSFLAPCPSSGLIINGTADRVAPPADTVGLVNKLHEQKGITI
CCCCCEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEE
THEEVEGADHFFQEPHMDTMIGSVTDYVKRRLTENTR
EHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]