| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ygfG [C]
Identifier: 99081055
GI number: 99081055
Start: 1302602
End: 1303312
Strand: Direct
Name: ygfG [C]
Synonym: TM1040_1214
Alternate gene names: 99081055
Gene position: 1302602-1303312 (Clockwise)
Preceding gene: 99081052
Following gene: 99081059
Centisome position: 40.69
GC content: 58.79
Gene sequence:
>711_bases ATGGAACGCGAGGAATGGATCAACCGTCGGCTGCATGGTGACGGCGTGGTCGAGCTACAGTTGGGGCATGCGCCTCAAAA CCAGCTCACGTCAGCTTTTCTGAAGGATTTTGCGCAAGAAATCAATGAGATGCGTTCTGATTCTGACGTGAGGTCCGTGC TGTTGACCAGCCCGTTCAAGGATTTTTCGACCGGCGTAGATCCTGAACTTAAGGATGTCAGCGCGCTGGAAGGTGACCTC AACGCTGCATTTCTGGCGCTCTATGCCTTCCCCAAGCCTGTTGTCGTTGCTTCTGTCGGCCTGAGCTCCGGGGCGGGCAT GTTTTTTGTATTGGCCAGCGACCTGCGGGTCGCCCACGCGCGGGCCGGATTTGAGCTGATCGACGTACAGTTGGGACGTG CCTATCCCGCCGCCTTGATGGAGATTGCCCGCGCGACGCTTGATACCAACACCCAGCGACGCTTGATGCTCACTGGACAG CGCCTCGGTCCGATTGCGGCCCGCAACGCGCAGTTCATCGAAGTCTTGGCAGATGACCTTGAGGATCTGCACGGTTACGC CCTGAAAGAGGCCCGACGTATGGCGCAACTGCCGGCGGAGGCTTATGCGGCGATCAAACGCGATCTGCGGACCGATACAA TCAAAAGGATCGAATCCCGCCTGGACGCCGCATTGCAGCCCACTTTTGGCACGTCGCGCCTCGCGAGCTGA
Upstream 100 bases:
>100_bases AGGCTGGTAACACAATAGCAAACCTCCCTCTCCAGACTCGGCCATGGTGGGTTTTCTGCAGAGTTATCTGCGGTGCCAAG AATTTGAATTTGGGGGACTT
Downstream 100 bases:
>100_bases GCGCGTGCTTGGATTTTTGAACCTGCGCGGTTAAACATGGCTCAAAACCAATAGGTTGGAGCGGGATGTTATGATCGCGA ACAAGATCGAAGTGCGCCGC
Product: enoyl-CoA hydratase/isomerase
Products: propionyl-CoA; CO2 [C]
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MEREEWINRRLHGDGVVELQLGHAPQNQLTSAFLKDFAQEINEMRSDSDVRSVLLTSPFKDFSTGVDPELKDVSALEGDL NAAFLALYAFPKPVVVASVGLSSGAGMFFVLASDLRVAHARAGFELIDVQLGRAYPAALMEIARATLDTNTQRRLMLTGQ RLGPIAARNAQFIEVLADDLEDLHGYALKEARRMAQLPAEAYAAIKRDLRTDTIKRIESRLDAALQPTFGTSRLAS
Sequences:
>Translated_236_residues MEREEWINRRLHGDGVVELQLGHAPQNQLTSAFLKDFAQEINEMRSDSDVRSVLLTSPFKDFSTGVDPELKDVSALEGDL NAAFLALYAFPKPVVVASVGLSSGAGMFFVLASDLRVAHARAGFELIDVQLGRAYPAALMEIARATLDTNTQRRLMLTGQ RLGPIAARNAQFIEVLADDLEDLHGYALKEARRMAQLPAEAYAAIKRDLRTDTIKRIESRLDAALQPTFGTSRLAS >Mature_236_residues MEREEWINRRLHGDGVVELQLGHAPQNQLTSAFLKDFAQEINEMRSDSDVRSVLLTSPFKDFSTGVDPELKDVSALEGDL NAAFLALYAFPKPVVVASVGLSSGAGMFFVLASDLRVAHARAGFELIDVQLGRAYPAALMEIARATLDTNTQRRLMLTGQ RLGPIAARNAQFIEVLADDLEDLHGYALKEARRMAQLPAEAYAAIKRDLRTDTIKRIESRLDAALQPTFGTSRLAS
Specific function: Unknown
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25956; Mature: 25956
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREEWINRRLHGDGVVELQLGHAPQNQLTSAFLKDFAQEINEMRSDSDVRSVLLTSPFK CCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH DFSTGVDPELKDVSALEGDLNAAFLALYAFPKPVVVASVGLSSGAGMFFVLASDLRVAHA HHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHHHHHHH RAGFELIDVQLGRAYPAALMEIARATLDTNTQRRLMLTGQRLGPIAARNAQFIEVLADDL HCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHH EDLHGYALKEARRMAQLPAEAYAAIKRDLRTDTIKRIESRLDAALQPTFGTSRLAS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC >Mature Secondary Structure MEREEWINRRLHGDGVVELQLGHAPQNQLTSAFLKDFAQEINEMRSDSDVRSVLLTSPFK CCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH DFSTGVDPELKDVSALEGDLNAAFLALYAFPKPVVVASVGLSSGAGMFFVLASDLRVAHA HHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHHHHHHH RAGFELIDVQLGRAYPAALMEIARATLDTNTQRRLMLTGQRLGPIAARNAQFIEVLADDL HCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHH EDLHGYALKEARRMAQLPAEAYAAIKRDLRTDTIKRIESRLDAALQPTFGTSRLAS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-methylmalonyl-CoA [C]
Specific reaction: L-methylmalonyl-CoA = propionyl-CoA + CO2 [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA