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The map label for this gene is ugpA [H]

Identifier: 99080691

GI number: 99080691

Start: 902829

End: 903710

Strand: Direct

Name: ugpA [H]

Synonym: TM1040_0850

Alternate gene names: 99080691

Gene position: 902829-903710 (Clockwise)

Preceding gene: 99080690

Following gene: 99080692

Centisome position: 28.21

GC content: 57.6

Gene sequence:

>882_bases
ATGCTGAAACGCGTCCATTTCCCATCTTCCCTGCTGCCCTACCTACTGGTCGCGCCTCAAATCGCGATCACTTTGGTGTT
TTTCATCTGGCCCGCCGCACAGGCGGTCTATCAGTCGTTCCTCATCGAGGATGCCTTTGGTTTGTCGACCGAATTCGTTT
GGTTGGAGAACTTCGAGCTGTTGTTTGAGGACGATATCTACCTGGCCACCTTTGGCCGGACGATCTTCTTTTCCGCTGCC
GTAGCGATCCTGTCTATGTCGCTGGCCCTGATTCTTGCGGGCTTCGCGGACCGGGTGGTGCGCGGCGCGACGGCCTATCG
CACACTCCTGATCTGGCCCTACGCCGTGGCGCCGGTTCTGGCGGGTGCGCTTTGGGTGTTCATGTTCAACCCGACGCTGG
GGATCTTCCCCTATATCCTTGATTTTGTCGGCGTGGACTGGAACCACTATCTCAACGGCAATCAGGCGATGGCTCTGGTG
GTCTTTGCCTCCGCTTGGAAGCAGATCGCCTATAACTTCCTGTTCTATCTTGCGGCGATGCAGGCCATTCCGCGCTCGGT
GATCGAGGCGGCGGCGATTGATGGGGCAGGCCCGATCCGCCGGTTCAAGGATTTCATCTTCCCGCTGGTGTCTCCGACCA
CCTTCTTCCTGTTGGTCATCAACGCGGTCTACGCCTTCTTTGACACCTTCGGCATTATCCACGCGGTGACGCAGGGCGGT
CCCGCAAATTCCACCACGATCCTTGTTTACAAGGTGTTCAACGACGGCTTTGTCGGGCTTGATCTTGGCGGCTCTGCCGC
ACAATCGGTGATCCTGATGGTGCTGGTCATTGCCATGACCGTGGTCCAGTTCCGCTTTGTCGAGAGAAGGGTGCAGTACT
GA

Upstream 100 bases:

>100_bases
GCGAAGTAATCGCCCAAAGGCTCTACCCGGTCTCGCAGCATTTGCGGGGCCGGGTAGGGCCGTTTTCTATCCTTTTTCTA
GAAAGGACCATGAGGCGCCT

Downstream 100 bases:

>100_bases
TGGTTGAAAATAGACCCATCCTGAACATCGTCAGCCACATTATCCTGATCCTCGGCATCGCGATCGTGGCGCTGCCCATC
TGGATTACCTTTGTGGCCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLKRVHFPSSLLPYLLVAPQIAITLVFFIWPAAQAVYQSFLIEDAFGLSTEFVWLENFELLFEDDIYLATFGRTIFFSAA
VAILSMSLALILAGFADRVVRGATAYRTLLIWPYAVAPVLAGALWVFMFNPTLGIFPYILDFVGVDWNHYLNGNQAMALV
VFASAWKQIAYNFLFYLAAMQAIPRSVIEAAAIDGAGPIRRFKDFIFPLVSPTTFFLLVINAVYAFFDTFGIIHAVTQGG
PANSTTILVYKVFNDGFVGLDLGGSAAQSVILMVLVIAMTVVQFRFVERRVQY

Sequences:

>Translated_293_residues
MLKRVHFPSSLLPYLLVAPQIAITLVFFIWPAAQAVYQSFLIEDAFGLSTEFVWLENFELLFEDDIYLATFGRTIFFSAA
VAILSMSLALILAGFADRVVRGATAYRTLLIWPYAVAPVLAGALWVFMFNPTLGIFPYILDFVGVDWNHYLNGNQAMALV
VFASAWKQIAYNFLFYLAAMQAIPRSVIEAAAIDGAGPIRRFKDFIFPLVSPTTFFLLVINAVYAFFDTFGIIHAVTQGG
PANSTTILVYKVFNDGFVGLDLGGSAAQSVILMVLVIAMTVVQFRFVERRVQY
>Mature_293_residues
MLKRVHFPSSLLPYLLVAPQIAITLVFFIWPAAQAVYQSFLIEDAFGLSTEFVWLENFELLFEDDIYLATFGRTIFFSAA
VAILSMSLALILAGFADRVVRGATAYRTLLIWPYAVAPVLAGALWVFMFNPTLGIFPYILDFVGVDWNHYLNGNQAMALV
VFASAWKQIAYNFLFYLAAMQAIPRSVIEAAAIDGAGPIRRFKDFIFPLVSPTTFFLLVINAVYAFFDTFGIIHAVTQGG
PANSTTILVYKVFNDGFVGLDLGGSAAQSVILMVLVIAMTVVQFRFVERRVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=57.0446735395189, Blast_Score=321, Evalue=4e-89,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=29.1338582677165, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787570, Length=268, Percent_Identity=26.4925373134328, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32600; Mature: 32600

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRVHFPSSLLPYLLVAPQIAITLVFFIWPAAQAVYQSFLIEDAFGLSTEFVWLENFEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEE
LFEDDIYLATFGRTIFFSAAVAILSMSLALILAGFADRVVRGATAYRTLLIWPYAVAPVL
EEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALWVFMFNPTLGIFPYILDFVGVDWNHYLNGNQAMALVVFASAWKQIAYNFLFYLAAM
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSVIEAAAIDGAGPIRRFKDFIFPLVSPTTFFLLVINAVYAFFDTFGIIHAVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PANSTTILVYKVFNDGFVGLDLGGSAAQSVILMVLVIAMTVVQFRFVERRVQY
CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKRVHFPSSLLPYLLVAPQIAITLVFFIWPAAQAVYQSFLIEDAFGLSTEFVWLENFEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEE
LFEDDIYLATFGRTIFFSAAVAILSMSLALILAGFADRVVRGATAYRTLLIWPYAVAPVL
EEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALWVFMFNPTLGIFPYILDFVGVDWNHYLNGNQAMALVVFASAWKQIAYNFLFYLAAM
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSVIEAAAIDGAGPIRRFKDFIFPLVSPTTFFLLVINAVYAFFDTFGIIHAVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PANSTTILVYKVFNDGFVGLDLGGSAAQSVILMVLVIAMTVVQFRFVERRVQY
CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA