Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080649

Identifier: 99080649

GI number: 99080649

Start: 854680

End: 855129

Strand: Direct

Name: 99080649

Synonym: TM1040_0808

Alternate gene names: NA

Gene position: 854680-855129 (Clockwise)

Preceding gene: 99080648

Following gene: 99080650

Centisome position: 26.7

GC content: 58.22

Gene sequence:

>450_bases
ATGAGCGTCATAGATAACTTCCCCCGGCCAGTGCAGGGCGACGTTTTCCGCATGCTTTGCGGCGAGATGTTGGGCAGCGG
CGCGGCGCGCGAAGTATTTGAGTGTGCGTATGACCCGAGCCTGGTTGTGAAGATCGAGAATGCCGCTGGGTCATTCCAGA
ACATTGCCGAGTGGCAGATGTGGTGGGACGCTCAGCATATACCGCATGCGGCTGAGTGGCTGGCCCCATGCGTCAGCATC
TCGCCATGCGGGATCGTTCTAATCCAGAAGCGAACAACGCCCGCGAAGCGCTACCCGGAGAAGCTGCCCGCATGGCTGAC
CGACACAAAGCGCACGAATTACGGAATGATCGGCAAGCGCTTTGTCTGCCACGACTATGGCGTGCATCTCATGTGCAATT
CCGGCCTTTCAAAGCGGAAGCGAAAAGTTGAGTGGTGGGACGCAGCATGA

Upstream 100 bases:

>100_bases
GCCACAGCCTGCCTACAGGACGCCCGCGCATCGTGGCCGTTGAGGGGCTGCTTCGTCCTTATCTCGGCGCCGGGCCGGGG
CAGGCGCGGATGGTGCGCGG

Downstream 100 bases:

>100_bases
CCACGATCCGCAGCAAAGTAACCGAAGCTTTCGACAAGATCGCGGCACGGCAGCCCGATGCCATCCAAACGGGCGCTATC
CGGCGCGTGGAGACAACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSVIDNFPRPVQGDVFRMLCGEMLGSGAAREVFECAYDPSLVVKIENAAGSFQNIAEWQMWWDAQHIPHAAEWLAPCVSI
SPCGIVLIQKRTTPAKRYPEKLPAWLTDTKRTNYGMIGKRFVCHDYGVHLMCNSGLSKRKRKVEWWDAA

Sequences:

>Translated_149_residues
MSVIDNFPRPVQGDVFRMLCGEMLGSGAAREVFECAYDPSLVVKIENAAGSFQNIAEWQMWWDAQHIPHAAEWLAPCVSI
SPCGIVLIQKRTTPAKRYPEKLPAWLTDTKRTNYGMIGKRFVCHDYGVHLMCNSGLSKRKRKVEWWDAA
>Mature_148_residues
SVIDNFPRPVQGDVFRMLCGEMLGSGAAREVFECAYDPSLVVKIENAAGSFQNIAEWQMWWDAQHIPHAAEWLAPCVSIS
PCGIVLIQKRTTPAKRYPEKLPAWLTDTKRTNYGMIGKRFVCHDYGVHLMCNSGLSKRKRKVEWWDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16930; Mature: 16799

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIDNFPRPVQGDVFRMLCGEMLGSGAAREVFECAYDPSLVVKIENAAGSFQNIAEWQM
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH
WWDAQHIPHAAEWLAPCVSISPCGIVLIQKRTTPAKRYPEKLPAWLTDTKRTNYGMIGKR
HHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHCHHHCCHHHCCCCCCCCCCCCCE
FVCHDYGVHLMCNSGLSKRKRKVEWWDAA
EEEECCCEEEEECCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SVIDNFPRPVQGDVFRMLCGEMLGSGAAREVFECAYDPSLVVKIENAAGSFQNIAEWQM
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH
WWDAQHIPHAAEWLAPCVSISPCGIVLIQKRTTPAKRYPEKLPAWLTDTKRTNYGMIGKR
HHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHCHHHCCHHHCCCCCCCCCCCCCE
FVCHDYGVHLMCNSGLSKRKRKVEWWDAA
EEEECCCEEEEECCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA