Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is ymfN [C]

Identifier: 99080635

GI number: 99080635

Start: 844130

End: 844861

Strand: Direct

Name: ymfN [C]

Synonym: TM1040_0794

Alternate gene names: 99080635

Gene position: 844130-844861 (Clockwise)

Preceding gene: 99080634

Following gene: 99080636

Centisome position: 26.37

GC content: 60.38

Gene sequence:

>732_bases
ATGTCAGCCGTTTTCGAGAGCGAAACACTGGGAGCCACAGAGCGTCTCATTATGCTCGCACTCGCTGATCATGCTGACGA
CGAGGGCCGCTGCTATCCATCAATCACCCGCTTGTGCCAGCGCACAGGGCTCGGGGAGCGAGCGGTGCAGACGAACATCA
GGAAACTCCAGGCGCAGGGCTATGTGGAGATCATACCGGGGGCCGGGCGGAATGGGTCCAACCTCTATTTCGTCCGCCCA
ACACCTACGCCACCCCCCGCACCAGATGCACCCCCGCACGAAATGCACCCCGCACCAGATGCACCACCCCCCCGCACGAA
ATGCACCCCTACCCCCGCACCAGATGCACCCAAACCGTCAGTAACCATCATTGAACCGTCATTACCCCTTGTAGTTCCCC
AGCGGGAAAAACCGAAAAAGCCAGACAAGGCACGGCTGCCCGAGGACTGGGCACCCAGTGACGAAGACCGAGCATACGCC
CTTTCACTGAACTTGACCGACGCCGAAATTGAGGAGATCGCAGATGACTTTCATGCCTATTGGACAGACCGGACAGACGC
TGGCGGAAGAAAGTCTCGACGCGGTTGGCGGCAAACGTGGCGCAACCGCTGTCGCGACGTCGCCCCAAAATTCATCCGAA
ATCGCCGGATGGCTGGCCAAGCATACACCGGCGGACATGGACAAGGCGGCGGTATCGCGGGCGCAGTCGCACGGCGTCAA
TTTGGAGGTTAG

Upstream 100 bases:

>100_bases
ACGTGGGATTTCGCTGCGTGTTCCCGACAGAGTTTGGCCCCGTCGAGAAGGGCGGGGCGGTTTATATCGAGATTGGAGGC
CAGCCATGAGCATCCGCATC

Downstream 100 bases:

>100_bases
GTACGAGGGACGATACCCGACCGGAGCCAACGGCGAGTATCTCCCCAGCTACGAGGTCGCAGTTGGGTGCCACATCCACG
GGACCACGGCTCAGCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSAVFESETLGATERLIMLALADHADDEGRCYPSITRLCQRTGLGERAVQTNIRKLQAQGYVEIIPGAGRNGSNLYFVRP
TPTPPPAPDAPPHEMHPAPDAPPPRTKCTPTPAPDAPKPSVTIIEPSLPLVVPQREKPKKPDKARLPEDWAPSDEDRAYA
LSLNLTDAEIEEIADDFHAYWTDRTDAGGRKSRRGWRQTWRNRCRDVAPKFIRNRRMAGQAYTGGHGQGGGIAGAVARRQ
FGG

Sequences:

>Translated_243_residues
MSAVFESETLGATERLIMLALADHADDEGRCYPSITRLCQRTGLGERAVQTNIRKLQAQGYVEIIPGAGRNGSNLYFVRP
TPTPPPAPDAPPHEMHPAPDAPPPRTKCTPTPAPDAPKPSVTIIEPSLPLVVPQREKPKKPDKARLPEDWAPSDEDRAYA
LSLNLTDAEIEEIADDFHAYWTDRTDAGGRKSRRGWRQTWRNRCRDVAPKFIRNRRMAGQAYTGGHGQGGGIAGAVARRQ
FGG
>Mature_242_residues
SAVFESETLGATERLIMLALADHADDEGRCYPSITRLCQRTGLGERAVQTNIRKLQAQGYVEIIPGAGRNGSNLYFVRPT
PTPPPAPDAPPHEMHPAPDAPPPRTKCTPTPAPDAPKPSVTIIEPSLPLVVPQREKPKKPDKARLPEDWAPSDEDRAYAL
SLNLTDAEIEEIADDFHAYWTDRTDAGGRKSRRGWRQTWRNRCRDVAPKFIRNRRMAGQAYTGGHGQGGGIAGAVARRQF
GG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26676; Mature: 26545

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVFESETLGATERLIMLALADHADDEGRCYPSITRLCQRTGLGERAVQTNIRKLQAQG
CCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YVEIIPGAGRNGSNLYFVRPTPTPPPAPDAPPHEMHPAPDAPPPRTKCTPTPAPDAPKPS
CEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VTIIEPSLPLVVPQREKPKKPDKARLPEDWAPSDEDRAYALSLNLTDAEIEEIADDFHAY
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
WTDRTDAGGRKSRRGWRQTWRNRCRDVAPKFIRNRRMAGQAYTGGHGQGGGIAGAVARRQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
FGG
CCC
>Mature Secondary Structure 
SAVFESETLGATERLIMLALADHADDEGRCYPSITRLCQRTGLGERAVQTNIRKLQAQG
CCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YVEIIPGAGRNGSNLYFVRPTPTPPPAPDAPPHEMHPAPDAPPPRTKCTPTPAPDAPKPS
CEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VTIIEPSLPLVVPQREKPKKPDKARLPEDWAPSDEDRAYALSLNLTDAEIEEIADDFHAY
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
WTDRTDAGGRKSRRGWRQTWRNRCRDVAPKFIRNRRMAGQAYTGGHGQGGGIAGAVARRQ
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
FGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA