The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080488

Identifier: 99080488

GI number: 99080488

Start: 691219

End: 691788

Strand: Reverse

Name: 99080488

Synonym: TM1040_0647

Alternate gene names: NA

Gene position: 691788-691219 (Counterclockwise)

Preceding gene: 99080489

Following gene: 99080486

Centisome position: 21.61

GC content: 66.14

Gene sequence:

>570_bases
ATGCAACACTACGAGTACAAGGTCGTCCCCGCTCCCAACAAGGGCAAGAAAGCGCGCGGCGTGAAAACACCCGAAGCCCG
CTTTGCACATGGGATTGAGGGGGTTTTGAACGAAATGGCCCAGCAGGGCTGGGAGTTTCAACGCGCCGAGATGCTGCCCA
GCGAAGAGCGCTCGGGCCTCACGGGCAGCAAGACAACCTGGCGCAATCTGCTGGTGTTTCGACGCGCACTTGGCAACACC
GGCCTCACAGAACCGACGCCAGCGACCGCGGCAGAGCCTGCGCCTGCCGTGGACAGCGCGCCCGAAGTCGCGGCCCCAGA
AGAGGCAGGCAAGGTCGATCTGCCTGACGACGCACCGCGTGTTTCCACCCCCGACGCACAGCATGCGCCAGAGCCGGCGC
CGCTGACCGCCATCGCAGGTGATCCCGAGGCCCCGCCCGAAGCCATTCCGGTCCCTGGCCCCGGCGCTCGCCGCATGGTT
GCCGATGATGGCGTCGAGGAATTGAGCCCCGTCTCAGGCCTGACCGCCGCACTCAAAGCGCGCGCAAGCCGAGGCAAGAC
GGACGACTAA

Upstream 100 bases:

>100_bases
GCCGCAACGCTCGACAAGACCTAAAACTAACCATGGCGCGCCTTTCGCTCTGCCCCGCAGAGCTGCTAGGCTCCTGCCCT
GGGCCGCACAGGAACAAGTG

Downstream 100 bases:

>100_bases
GTCCAACGAATGCAGGATCCGGCCACATTAGGCGTGGCCGGATCTTGTGTCTCAGCTGCCGATGTCCAGTGCAAGTGCGT
GAATACGTGGCACGATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT
GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV
ADDGVEELSPVSGLTAALKARASRGKTDD

Sequences:

>Translated_189_residues
MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT
GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV
ADDGVEELSPVSGLTAALKARASRGKTDD
>Mature_189_residues
MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT
GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV
ADDGVEELSPVSGLTAALKARASRGKTDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19869; Mature: 19869

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGL
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCC
TGSKTTWRNLLVFRRALGNTGLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMVADDGVEELSPVSGLTAALKA
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
RASRGKTDD
HHCCCCCCC
>Mature Secondary Structure
MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGL
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCC
TGSKTTWRNLLVFRRALGNTGLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMVADDGVEELSPVSGLTAALKA
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
RASRGKTDD
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA