| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080488
Identifier: 99080488
GI number: 99080488
Start: 691219
End: 691788
Strand: Reverse
Name: 99080488
Synonym: TM1040_0647
Alternate gene names: NA
Gene position: 691788-691219 (Counterclockwise)
Preceding gene: 99080489
Following gene: 99080486
Centisome position: 21.61
GC content: 66.14
Gene sequence:
>570_bases ATGCAACACTACGAGTACAAGGTCGTCCCCGCTCCCAACAAGGGCAAGAAAGCGCGCGGCGTGAAAACACCCGAAGCCCG CTTTGCACATGGGATTGAGGGGGTTTTGAACGAAATGGCCCAGCAGGGCTGGGAGTTTCAACGCGCCGAGATGCTGCCCA GCGAAGAGCGCTCGGGCCTCACGGGCAGCAAGACAACCTGGCGCAATCTGCTGGTGTTTCGACGCGCACTTGGCAACACC GGCCTCACAGAACCGACGCCAGCGACCGCGGCAGAGCCTGCGCCTGCCGTGGACAGCGCGCCCGAAGTCGCGGCCCCAGA AGAGGCAGGCAAGGTCGATCTGCCTGACGACGCACCGCGTGTTTCCACCCCCGACGCACAGCATGCGCCAGAGCCGGCGC CGCTGACCGCCATCGCAGGTGATCCCGAGGCCCCGCCCGAAGCCATTCCGGTCCCTGGCCCCGGCGCTCGCCGCATGGTT GCCGATGATGGCGTCGAGGAATTGAGCCCCGTCTCAGGCCTGACCGCCGCACTCAAAGCGCGCGCAAGCCGAGGCAAGAC GGACGACTAA
Upstream 100 bases:
>100_bases GCCGCAACGCTCGACAAGACCTAAAACTAACCATGGCGCGCCTTTCGCTCTGCCCCGCAGAGCTGCTAGGCTCCTGCCCT GGGCCGCACAGGAACAAGTG
Downstream 100 bases:
>100_bases GTCCAACGAATGCAGGATCCGGCCACATTAGGCGTGGCCGGATCTTGTGTCTCAGCTGCCGATGTCCAGTGCAAGTGCGT GAATACGTGGCACGATATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV ADDGVEELSPVSGLTAALKARASRGKTDD
Sequences:
>Translated_189_residues MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV ADDGVEELSPVSGLTAALKARASRGKTDD >Mature_189_residues MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGLTGSKTTWRNLLVFRRALGNT GLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPRVSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMV ADDGVEELSPVSGLTAALKARASRGKTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19869; Mature: 19869
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGL CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCC TGSKTTWRNLLVFRRALGNTGLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMVADDGVEELSPVSGLTAALKA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH RASRGKTDD HHCCCCCCC >Mature Secondary Structure MQHYEYKVVPAPNKGKKARGVKTPEARFAHGIEGVLNEMAQQGWEFQRAEMLPSEERSGL CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCC TGSKTTWRNLLVFRRALGNTGLTEPTPATAAEPAPAVDSAPEVAAPEEAGKVDLPDDAPR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSTPDAQHAPEPAPLTAIAGDPEAPPEAIPVPGPGARRMVADDGVEELSPVSGLTAALKA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH RASRGKTDD HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA