| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080479
Identifier: 99080479
GI number: 99080479
Start: 681506
End: 681781
Strand: Direct
Name: 99080479
Synonym: TM1040_0638
Alternate gene names: NA
Gene position: 681506-681781 (Clockwise)
Preceding gene: 99080478
Following gene: 99080487
Centisome position: 21.29
GC content: 57.97
Gene sequence:
>276_bases ATGGGTATCACTTCCGGTCTCGTGCTCTATGCGGTCATCTGGTTCATGACTTTCCTGGTGGTGATCCCCATTCGACTGGA AACACAGGGCGACACAGGAAAGATTGTACCCGGTACCCATGCCGGGGCGCCGGAACGGCACTATCTCAAGCAGAAGGCCT GGATCACCACGGGCGCGGCTGCCGTGATCTGGGCCATCGTCGCCGGGATCATCCTGTCGGGAATGATTACCGTAAACGAC TTTGACTGGTTTGATCGCCTGCCAGATCGGCCCTGA
Upstream 100 bases:
>100_bases CGGCTGCCTGGTGGAACTCGAAGAGGTTTGAGGCTAGATGCAGGGAAGGGCGCGCGGCGCCGCCCTGCGATCTGTCTTGG CCCTTTGAAAGGAACCTCCC
Downstream 100 bases:
>100_bases TCCCCATTCCATCTGTTGAGCGCCATGCGCTACGACGCTGATTTGTTCGCAAGGTCGGGAGATCGACGGCGTGTGAGAGC GAGCTCGTGTGAGTCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGITSGLVLYAVIWFMTFLVVIPIRLETQGDTGKIVPGTHAGAPERHYLKQKAWITTGAAAVIWAIVAGIILSGMITVND FDWFDRLPDRP
Sequences:
>Translated_91_residues MGITSGLVLYAVIWFMTFLVVIPIRLETQGDTGKIVPGTHAGAPERHYLKQKAWITTGAAAVIWAIVAGIILSGMITVND FDWFDRLPDRP >Mature_90_residues GITSGLVLYAVIWFMTFLVVIPIRLETQGDTGKIVPGTHAGAPERHYLKQKAWITTGAAAVIWAIVAGIILSGMITVNDF DWFDRLPDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10011; Mature: 9880
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITSGLVLYAVIWFMTFLVVIPIRLETQGDTGKIVPGTHAGAPERHYLKQKAWITTGAA CCCCHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH AVIWAIVAGIILSGMITVNDFDWFDRLPDRP HHHHHHHHHHHHHCCCEECCCCHHHCCCCCC >Mature Secondary Structure GITSGLVLYAVIWFMTFLVVIPIRLETQGDTGKIVPGTHAGAPERHYLKQKAWITTGAA CCCHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH AVIWAIVAGIILSGMITVNDFDWFDRLPDRP HHHHHHHHHHHHHCCCEECCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA