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The map label for this gene is yqjC [H]

Identifier: 99080478

GI number: 99080478

Start: 681032

End: 681436

Strand: Direct

Name: yqjC [H]

Synonym: TM1040_0637

Alternate gene names: 99080478

Gene position: 681032-681436 (Clockwise)

Preceding gene: 99080476

Following gene: 99080479

Centisome position: 21.28

GC content: 56.79

Gene sequence:

>405_bases
ATGATCGGACGTTTGAACCATGTCGCCATTGCCGTGCCAGATCTGGAGGCCGCCATGGCCCAGTATCGCGACACCCTTGG
CGCCAATGTCGGTGCACCTCAGGATGAACCTGACCATGGTGTGACAGTGGTCTTCATTGAGTTGCCCAACACCAAGATCG
AGCTTCTGTATCCTTTGGGAGAGGGCTCTCCGATCCAGGGTTTTCTCGAGAAGAATCCGGCCGGCGGCATTCATCACATC
TGTTATGAGGTCGATGACATCCTCGCTGCCCGAGATCGGCTCAAGGCACAGGGTGCGCGGGTGCTCGGAACCGGAGAGCC
AAAGATCGGTGCCCATGGCAAGCCGGTTCTTTTCCTGCATCCCAAAGATTTCAACGGCTGCCTGGTGGAACTCGAAGAGG
TTTGA

Upstream 100 bases:

>100_bases
CCAATTTTTGCAACCTGAGCGTGCGTAGGTGGGCTTGCAAGAAACGTGCGGTTTTGATCTTTACGGAGACATATCGTTTC
AAAGCCTCGGGAGAACCCCC

Downstream 100 bases:

>100_bases
GGCTAGATGCAGGGAAGGGCGCGCGGCGCCGCCCTGCGATCTGTCTTGGCCCTTTGAAAGGAACCTCCCATGGGTATCAC
TTCCGGTCTCGTGCTCTATG

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIGRLNHVAIAVPDLEAAMAQYRDTLGANVGAPQDEPDHGVTVVFIELPNTKIELLYPLGEGSPIQGFLEKNPAGGIHHI
CYEVDDILAARDRLKAQGARVLGTGEPKIGAHGKPVLFLHPKDFNGCLVELEEV

Sequences:

>Translated_134_residues
MIGRLNHVAIAVPDLEAAMAQYRDTLGANVGAPQDEPDHGVTVVFIELPNTKIELLYPLGEGSPIQGFLEKNPAGGIHHI
CYEVDDILAARDRLKAQGARVLGTGEPKIGAHGKPVLFLHPKDFNGCLVELEEV
>Mature_134_residues
MIGRLNHVAIAVPDLEAAMAQYRDTLGANVGAPQDEPDHGVTVVFIELPNTKIELLYPLGEGSPIQGFLEKNPAGGIHHI
CYEVDDILAARDRLKAQGARVLGTGEPKIGAHGKPVLFLHPKDFNGCLVELEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=132, Percent_Identity=64.3939393939394, Blast_Score=163, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17506387, Length=133, Percent_Identity=57.8947368421053, Blast_Score=155, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14411; Mature: 14411

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRLNHVAIAVPDLEAAMAQYRDTLGANVGAPQDEPDHGVTVVFIELPNTKIELLYPLG
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
EGSPIQGFLEKNPAGGIHHICYEVDDILAARDRLKAQGARVLGTGEPKIGAHGKPVLFLH
CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGCLVELEEV
CCCCCCEEEEEECC
>Mature Secondary Structure
MIGRLNHVAIAVPDLEAAMAQYRDTLGANVGAPQDEPDHGVTVVFIELPNTKIELLYPLG
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
EGSPIQGFLEKNPAGGIHHICYEVDDILAARDRLKAQGARVLGTGEPKIGAHGKPVLFLH
CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGCLVELEEV
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]