| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is kdpE [C]
Identifier: 99080477
GI number: 99080477
Start: 680127
End: 680846
Strand: Reverse
Name: kdpE [C]
Synonym: TM1040_0636
Alternate gene names: 99080477
Gene position: 680846-680127 (Counterclockwise)
Preceding gene: 99080480
Following gene: 99080473
Centisome position: 21.27
GC content: 61.11
Gene sequence:
>720_bases ATGGACGATTCGGATCTTTTTTCTTCTGCAGCCCGTCTGGGCAGCGGTCGCCGCCCACTTCTGGGGCTGACGATCCTTGT GGTCGAGGACAGCCGTTATGCATGTGAAGCAATGCGACTTTTGTGTTTGCGCAGCGGGGCTCGGATTCGGCGCGCCGACA GTCTCAAGTCCGCCCGCAGGCATCTTCAGGTCTATCGCCCCTCTGTGGTGATCATCGACCTGGGCTTGCCCGATGGGTCC GGTGCCGAGCTCATTGAGGCGCTTTCCACGGCTTCGCCGCGGGTTGCCGTGATCCTCGGCATTTCTGGTGATGAAAATGC CGAGGCAGCCGCCATGGCAGCTGGCGCAGACGGCTTTCTTCCCAAGCCCATCGTCTCGCTCGCCGCCTTCCAGAACGCGA TCCTTTCGAACATGCCTCCGGAACGTCAACCCATCGGGCCGCGCCCAATGACAGATGAATCGGTAGAACCTGACATGCTC GCGTTCCGCGATGACATGGCACATGCGGCCGAGGTTCTGGATGAAGGCAAGGACGAGCAGACGCTCGACTACCTGGCGCA ATTCCTGGGAGGCGTGGCGCGAAGCGTCGGGGATGCCCCGCTTGAAACCGCTGCAACGCGCCTCCAAGAGACGCGCAAAT CTGGTGGGCCGCTGGCCGTTGAAACTGCAATGATTGCCGATCTCGTACAGGAGCGGCTCCAACGCAAGATTGCGATCTGA
Upstream 100 bases:
>100_bases GGTTGCAAAAATTGGGTATGAGAGCGCTCCCAGGCGCGAGTTAAGAACTTGTTAGCCCAGAATCCCTAGCGTCTTAGCAG GTTATTAGTGAGGTCAGGAC
Downstream 100 bases:
>100_bases ACCATGCTGCAGTCCCTTGTCATCGCTTCGCTGACGCTGGTCATCGTCCTGGCCGTGCAGTCTCGTCTCAGCTCCTCTGA CACAGAGGCCTCTCGTCATT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MDDSDLFSSAARLGSGRRPLLGLTILVVEDSRYACEAMRLLCLRSGARIRRADSLKSARRHLQVYRPSVVIIDLGLPDGS GAELIEALSTASPRVAVILGISGDENAEAAAMAAGADGFLPKPIVSLAAFQNAILSNMPPERQPIGPRPMTDESVEPDML AFRDDMAHAAEVLDEGKDEQTLDYLAQFLGGVARSVGDAPLETAATRLQETRKSGGPLAVETAMIADLVQERLQRKIAI
Sequences:
>Translated_239_residues MDDSDLFSSAARLGSGRRPLLGLTILVVEDSRYACEAMRLLCLRSGARIRRADSLKSARRHLQVYRPSVVIIDLGLPDGS GAELIEALSTASPRVAVILGISGDENAEAAAMAAGADGFLPKPIVSLAAFQNAILSNMPPERQPIGPRPMTDESVEPDML AFRDDMAHAAEVLDEGKDEQTLDYLAQFLGGVARSVGDAPLETAATRLQETRKSGGPLAVETAMIADLVQERLQRKIAI >Mature_239_residues MDDSDLFSSAARLGSGRRPLLGLTILVVEDSRYACEAMRLLCLRSGARIRRADSLKSARRHLQVYRPSVVIIDLGLPDGS GAELIEALSTASPRVAVILGISGDENAEAAAMAAGADGFLPKPIVSLAAFQNAILSNMPPERQPIGPRPMTDESVEPDML AFRDDMAHAAEVLDEGKDEQTLDYLAQFLGGVARSVGDAPLETAATRLQETRKSGGPLAVETAMIADLVQERLQRKIAI
Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786911, Length=216, Percent_Identity=26.3888888888889, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25520; Mature: 25520
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDSDLFSSAARLGSGRRPLLGLTILVVEDSRYACEAMRLLCLRSGARIRRADSLKSARR CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HLQVYRPSVVIIDLGLPDGSGAELIEALSTASPRVAVILGISGDENAEAAAMAAGADGFL HHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCC PKPIVSLAAFQNAILSNMPPERQPIGPRPMTDESVEPDMLAFRDDMAHAAEVLDEGKDEQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH TLDYLAQFLGGVARSVGDAPLETAATRLQETRKSGGPLAVETAMIADLVQERLQRKIAI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDSDLFSSAARLGSGRRPLLGLTILVVEDSRYACEAMRLLCLRSGARIRRADSLKSARR CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HLQVYRPSVVIIDLGLPDGSGAELIEALSTASPRVAVILGISGDENAEAAAMAAGADGFL HHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCC PKPIVSLAAFQNAILSNMPPERQPIGPRPMTDESVEPDMLAFRDDMAHAAEVLDEGKDEQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH TLDYLAQFLGGVARSVGDAPLETAATRLQETRKSGGPLAVETAMIADLVQERLQRKIAI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA