| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080462
Identifier: 99080462
GI number: 99080462
Start: 660413
End: 660676
Strand: Direct
Name: 99080462
Synonym: TM1040_0621
Alternate gene names: NA
Gene position: 660413-660676 (Clockwise)
Preceding gene: 99080458
Following gene: 99080463
Centisome position: 20.63
GC content: 57.95
Gene sequence:
>264_bases ATGAACCGGGAGATGGCCATGCAGACCCGCAACAAGATTATGGACGACATTTCGCAACTGATGACCAACGCTATGGGCGT GGCGCAGGGGGCGAAAGACGAAGCCGAAACCGCGATGAAAAGCATGATTGATCGCTGGCTCGCAGATCGCGATTTCGTGA CCCGCGAAGAGTTCGACGCCGTACGCGCCATGGCACAGAAAGCGCGCGAGGAAAACGAAGCGCTGAAGGCGCGTCTGGAC GCGCTCGAAACTAAGGCCGACTAA
Upstream 100 bases:
>100_bases GCATGGGGTCTTCTGTGCCTCTTTGGGGCAAGTCCTGTCAACGGCTTGCCGTTTGCGCCTCAAGTGCCCATATAGGGGGT AAGCCTCGCAGAGGTAAGAC
Downstream 100 bases:
>100_bases AAAGAACACGCGCCGCGCTTCGGTCGCTGTGTGGTCGCCACAGGTGGTGCTTCCCACGGTGAATGTTCCGAGATCTTTGA ATATGGGAAAAGGGATGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MNREMAMQTRNKIMDDISQLMTNAMGVAQGAKDEAETAMKSMIDRWLADRDFVTREEFDAVRAMAQKAREENEALKARLD ALETKAD
Sequences:
>Translated_87_residues MNREMAMQTRNKIMDDISQLMTNAMGVAQGAKDEAETAMKSMIDRWLADRDFVTREEFDAVRAMAQKAREENEALKARLD ALETKAD >Mature_87_residues MNREMAMQTRNKIMDDISQLMTNAMGVAQGAKDEAETAMKSMIDRWLADRDFVTREEFDAVRAMAQKAREENEALKARLD ALETKAD
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9927; Mature: 9927
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.3 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.3 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNREMAMQTRNKIMDDISQLMTNAMGVAQGAKDEAETAMKSMIDRWLADRDFVTREEFDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VRAMAQKAREENEALKARLDALETKAD HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNREMAMQTRNKIMDDISQLMTNAMGVAQGAKDEAETAMKSMIDRWLADRDFVTREEFDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VRAMAQKAREENEALKARLDALETKAD HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA