| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080458
Identifier: 99080458
GI number: 99080458
Start: 657064
End: 657369
Strand: Direct
Name: 99080458
Synonym: TM1040_0617
Alternate gene names: NA
Gene position: 657064-657369 (Clockwise)
Preceding gene: 99080456
Following gene: 99080462
Centisome position: 20.53
GC content: 55.56
Gene sequence:
>306_bases ATGAAGCCTGTGCGTCGATGTCACAGGCATGCCGGTTTCACCGACATCGTTTGTCTCAAGAGAGCGAAGAGCCATCAGGC GGATTTGGCGACCGGAGCCTCTGCGTCAGAGGCGTCGTTGCGTCGGGCAATCATCTCTTTGCGCAGCGTTCCGCGGGTCC AGGGCATTTTGACCTCTTGCGATGAGGAGGCCGAGATGATGGATTTCACGAACCGTGATTGCGCGGGCATTCTTCTTCTC CTGTCCACCTCAAAGGGTGGCCGAATTCTTTCTCTGAAATCGTTTTCCACCAACATTGCGGTCTGA
Upstream 100 bases:
>100_bases AGCGTCCGCTTGCTCTCAATCCGCGCAGCTTGTGTCTGACGGGCAGAACATCGGGCGAACACGCGTTGAGTGACGCGGCC AAGGCAGGCAAGACCGGGCT
Downstream 100 bases:
>100_bases ATATGACCGATAGATGGAAAGACAGGACGCGCTGTTTGCAGCGCCAAATGCAGAGGCGGCTGTCTCTAGTGGTTTGATTT TTTGCAGAAACGCTACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKPVRRCHRHAGFTDIVCLKRAKSHQADLATGASASEASLRRAIISLRSVPRVQGILTSCDEEAEMMDFTNRDCAGILLL LSTSKGGRILSLKSFSTNIAV
Sequences:
>Translated_101_residues MKPVRRCHRHAGFTDIVCLKRAKSHQADLATGASASEASLRRAIISLRSVPRVQGILTSCDEEAEMMDFTNRDCAGILLL LSTSKGGRILSLKSFSTNIAV >Mature_101_residues MKPVRRCHRHAGFTDIVCLKRAKSHQADLATGASASEASLRRAIISLRSVPRVQGILTSCDEEAEMMDFTNRDCAGILLL LSTSKGGRILSLKSFSTNIAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10959; Mature: 10959
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVRRCHRHAGFTDIVCLKRAKSHQADLATGASASEASLRRAIISLRSVPRVQGILTSC CCHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCC DEEAEMMDFTNRDCAGILLLLSTSKGGRILSLKSFSTNIAV CCHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKPVRRCHRHAGFTDIVCLKRAKSHQADLATGASASEASLRRAIISLRSVPRVQGILTSC CCHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCC DEEAEMMDFTNRDCAGILLLLSTSKGGRILSLKSFSTNIAV CCHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA