Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yeaH [C]

Identifier: 99080375

GI number: 99080375

Start: 565370

End: 566272

Strand: Direct

Name: yeaH [C]

Synonym: TM1040_0534

Alternate gene names: 99080375

Gene position: 565370-566272 (Clockwise)

Preceding gene: 99080374

Following gene: 99080376

Centisome position: 17.66

GC content: 57.92

Gene sequence:

>903_bases
GTGGAAAAAGCCACGGTAGAGACGGAAACCATCGGCACCCGTCGCGCTGGCCTGACAACGGCTGGTACGCCCAACAACCT
CAATCTGGTGCGCACCATGCGCAATTCCTTGGGGCGCCGCATCGCGCTGCAGCGCCCGAGCACGCAAACGCAGCGGGACC
TGGAGGCGCAGGTCGCCGAATTGGAGGAGATCGAGGCCCGCTCGCCGAGCCAAGACGAATTACTGGCCGAGCTCGTCGCA
AAGCTTGATGGCATCAAGCGCAAGCGCCGGGTTGTGGGCTACATCGACCCGCTCGATTTGCGCTATGATACCTTTGTGCC
GGAGAAAATCCGCAACTCCCGCGCGGTGGTGTTTTGCCTGATGGATGTTTCGGGCTCGATGCAGGAGCGTGAAAAGGATC
TCGCGAAACGGTTTTTCCTGCTTCTACATCTGTTCCTGACGCGTGGCTACGAGCACACGGAGATCGTCTTTGTCCGCCAC
ACCCACTATGCGCAGGAAGTGGACGAAGAGACTTTCTTTTATGCCCGCGAAACCGGTGGGACTATTGTCTCTACGGCGCT
GGAAAAGATGAAGGAAATCATCGACGAGCGCTATCCGCCGGATGAATGGAACATCTACGGTGCGCAGGCCTCGGACGGGG
AGAATTTTGGCAACGACTCGGTGCGGTGTCGCAAGATCCTGACCGAGCAATTGCTGCCGATGTGTCAGTTCTACGCCTAT
GTGGAAATCGTCGAAGAAAGCGCGCAGATGCTTTTGGACAATACCGAGGCGGGTGAGGACCTGTGGCAGAACTACCGGCA
AGTCAAAGAGGCCTGCCGCCATTTTGAGATGCAGCGCGTCTCGGAGCCGGGTCATATCTATCCGATCTTCCGGGAGTTCT
TCCTGCCCAAAGTGAAAGGCTGA

Upstream 100 bases:

>100_bases
AGGCTTCTGAGGATGGGGGGGGGATGACGAGTTTTCCTTCACCCTGACACGGGATGAATATCTCGAAATCCTGTTCGACG
GGCTGGAGCTGCCGGATCTG

Downstream 100 bases:

>100_bases
CCGCGATGGAGACTGCAAAAACCGCCACCGCCCCCCTGTTTGATGGGCCAGAGTGGACGTTTGAGCTCTTGGAGAAGGCC
CGCGACGCGATTGAGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRIALQRPSTQTQRDLEAQVAELEEIEARSPSQDELLAELVA
KLDGIKRKRRVVGYIDPLDLRYDTFVPEKIRNSRAVVFCLMDVSGSMQEREKDLAKRFFLLLHLFLTRGYEHTEIVFVRH
THYAQEVDEETFFYARETGGTIVSTALEKMKEIIDERYPPDEWNIYGAQASDGENFGNDSVRCRKILTEQLLPMCQFYAY
VEIVEESAQMLLDNTEAGEDLWQNYRQVKEACRHFEMQRVSEPGHIYPIFREFFLPKVKG

Sequences:

>Translated_300_residues
MEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRIALQRPSTQTQRDLEAQVAELEEIEARSPSQDELLAELVA
KLDGIKRKRRVVGYIDPLDLRYDTFVPEKIRNSRAVVFCLMDVSGSMQEREKDLAKRFFLLLHLFLTRGYEHTEIVFVRH
THYAQEVDEETFFYARETGGTIVSTALEKMKEIIDERYPPDEWNIYGAQASDGENFGNDSVRCRKILTEQLLPMCQFYAY
VEIVEESAQMLLDNTEAGEDLWQNYRQVKEACRHFEMQRVSEPGHIYPIFREFFLPKVKG
>Mature_300_residues
MEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRIALQRPSTQTQRDLEAQVAELEEIEARSPSQDELLAELVA
KLDGIKRKRRVVGYIDPLDLRYDTFVPEKIRNSRAVVFCLMDVSGSMQEREKDLAKRFFLLLHLFLTRGYEHTEIVFVRH
THYAQEVDEETFFYARETGGTIVSTALEKMKEIIDERYPPDEWNIYGAQASDGENFGNDSVRCRKILTEQLLPMCQFYAY
VEIVEESAQMLLDNTEAGEDLWQNYRQVKEACRHFEMQRVSEPGHIYPIFREFFLPKVKG

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=284, Percent_Identity=44.3661971830986, Blast_Score=248, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 34784; Mature: 34784

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRIALQRPSTQTQRDLEAQVAE
CCCCCCCHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH
LEEIEARSPSQDELLAELVAKLDGIKRKRRVVGYIDPLDLRYDTFVPEKIRNSRAVVFCL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCEEEEEE
MDVSGSMQEREKDLAKRFFLLLHLFLTRGYEHTEIVFVRHTHYAQEVDEETFFYARETGG
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCHHHEEEECCCCC
TIVSTALEKMKEIIDERYPPDEWNIYGAQASDGENFGNDSVRCRKILTEQLLPMCQFYAY
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VEIVEESAQMLLDNTEAGEDLWQNYRQVKEACRHFEMQRVSEPGHIYPIFREFFLPKVKG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRIALQRPSTQTQRDLEAQVAE
CCCCCCCHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH
LEEIEARSPSQDELLAELVAKLDGIKRKRRVVGYIDPLDLRYDTFVPEKIRNSRAVVFCL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCEEEEEE
MDVSGSMQEREKDLAKRFFLLLHLFLTRGYEHTEIVFVRHTHYAQEVDEETFFYARETGG
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCHHHEEEECCCCC
TIVSTALEKMKEIIDERYPPDEWNIYGAQASDGENFGNDSVRCRKILTEQLLPMCQFYAY
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VEIVEESAQMLLDNTEAGEDLWQNYRQVKEACRHFEMQRVSEPGHIYPIFREFFLPKVKG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]