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The map label for this gene is rsmI [H]

Identifier: 99080289

GI number: 99080289

Start: 466570

End: 467433

Strand: Direct

Name: rsmI [H]

Synonym: TM1040_0448

Alternate gene names: 99080289

Gene position: 466570-467433 (Clockwise)

Preceding gene: 99080285

Following gene: 99080290

Centisome position: 14.58

GC content: 63.43

Gene sequence:

>864_bases
GTGAATCATAAAATCGTCAGTTTACCGCCGGGGTTGTACTTCGTCGCAACGCCCATCGGCACGGCCCGTGACATCACGTT
GCGTGCGCTTGACATATTGGCGTCCGCCGATGTGATTGCAGCCGAAGACACACGTTCGATGCGCAAGTTGCTCGACATCC
ACGGGGTCCCGCTCGGGGATCGTCCGGTGGTGGCCTATCACGACCATTCCGGCACGGGCGCGCGGGCGCGCCTGATGGCG
GATCTCGCGGCGGGCAAGTCGGTGGCCTATGCATCCGAGGCAGGTATGCCGATGATTGCAGACCCGGGGTATGATCTGAG
CCGCGAGGCCGCGCGGGCTGGCCATCTGGTCACCGCCGCACCGGGGGCATCGGCGGCGCTTTGTGCGCTCACATTGGCGG
GGCTGCCGACAGATGCGTTTTTCTTTGCAGGCTTTTTGCCGAACGCCAGCGGGGCGCGGCGCAAACGACTGCAGGAGGTC
GGAAATATCCCCGGCACGCTCGTTTTCTACGAATCACCCAAGCGCGTTGCCGCGTCGCTGGCCGATATGGCAGAGGTCCT
TGGCGCGCGCGACGCGGCCCTCTGTCGTGAGCTTACCAAAAAATTTGAAGAGGTGCGCCGAGGGCCGCTTGCTGAGCTTG
CCTCCGGGCTTGCCGACGCACCGGTAAAGGGTGAAATCGTGATCCTCGTCGACCGCCAGCGCGCGGCGACAGTCACGGCT
GCTGATCTGGAGGCGGATCTGCGCGCCGCGTTGCGGGAGAACTCTGTCAAGGACGCAGCAGCGATTGTCGCCGAAGCCCA
TGGTGAGCCGCGACGCAAAATCTATCAACAAGCGCTGCAGATTGCGCGCGAAGATCAAGGATAG

Upstream 100 bases:

>100_bases
CATAAAGCGCATAAACTCCCTGTTCCGGGCCGCAACGATATGCGAGGCGTACCCGTTTTGGTTTGGAGCGATCATAGACG
ACCAGAAAAGCGGGTCCAGC

Downstream 100 bases:

>100_bases
AAGTCATGACGCAGGACGCACGCGCAAGAGGGCAGAACGCTCATTTTGCGGGCGCGGCTGCCGAAGAGATCGCGATCCGC
GCCTATCTGGCGCGAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNHKIVSLPPGLYFVATPIGTARDITLRALDILASADVIAAEDTRSMRKLLDIHGVPLGDRPVVAYHDHSGTGARARLMA
DLAAGKSVAYASEAGMPMIADPGYDLSREAARAGHLVTAAPGASAALCALTLAGLPTDAFFFAGFLPNASGARRKRLQEV
GNIPGTLVFYESPKRVAASLADMAEVLGARDAALCRELTKKFEEVRRGPLAELASGLADAPVKGEIVILVDRQRAATVTA
ADLEADLRAALRENSVKDAAAIVAEAHGEPRRKIYQQALQIAREDQG

Sequences:

>Translated_287_residues
MNHKIVSLPPGLYFVATPIGTARDITLRALDILASADVIAAEDTRSMRKLLDIHGVPLGDRPVVAYHDHSGTGARARLMA
DLAAGKSVAYASEAGMPMIADPGYDLSREAARAGHLVTAAPGASAALCALTLAGLPTDAFFFAGFLPNASGARRKRLQEV
GNIPGTLVFYESPKRVAASLADMAEVLGARDAALCRELTKKFEEVRRGPLAELASGLADAPVKGEIVILVDRQRAATVTA
ADLEADLRAALRENSVKDAAAIVAEAHGEPRRKIYQQALQIAREDQG
>Mature_287_residues
MNHKIVSLPPGLYFVATPIGTARDITLRALDILASADVIAAEDTRSMRKLLDIHGVPLGDRPVVAYHDHSGTGARARLMA
DLAAGKSVAYASEAGMPMIADPGYDLSREAARAGHLVTAAPGASAALCALTLAGLPTDAFFFAGFLPNASGARRKRLQEV
GNIPGTLVFYESPKRVAASLADMAEVLGARDAALCRELTKKFEEVRRGPLAELASGLADAPVKGEIVILVDRQRAATVTA
ADLEADLRAALRENSVKDAAAIVAEAHGEPRRKIYQQALQIAREDQG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=279, Percent_Identity=41.5770609318996, Blast_Score=174, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30252; Mature: 30252

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKIVSLPPGLYFVATPIGTARDITLRALDILASADVIAAEDTRSMRKLLDIHGVPLGD
CCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCC
RPVVAYHDHSGTGARARLMADLAAGKSVAYASEAGMPMIADPGYDLSREAARAGHLVTAA
CCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCEEECCCCCCHHHHHHCCCEEEEC
PGASAALCALTLAGLPTDAFFFAGFLPNASGARRKRLQEVGNIPGTLVFYESPKRVAASL
CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
ADMAEVLGARDAALCRELTKKFEEVRRGPLAELASGLADAPVKGEIVILVDRQRAATVTA
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEEH
ADLEADLRAALRENSVKDAAAIVAEAHGEPRRKIYQQALQIAREDQG
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNHKIVSLPPGLYFVATPIGTARDITLRALDILASADVIAAEDTRSMRKLLDIHGVPLGD
CCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCC
RPVVAYHDHSGTGARARLMADLAAGKSVAYASEAGMPMIADPGYDLSREAARAGHLVTAA
CCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCEEECCCCCCHHHHHHCCCEEEEC
PGASAALCALTLAGLPTDAFFFAGFLPNASGARRKRLQEVGNIPGTLVFYESPKRVAASL
CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
ADMAEVLGARDAALCRELTKKFEEVRRGPLAELASGLADAPVKGEIVILVDRQRAATVTA
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEEH
ADLEADLRAALRENSVKDAAAIVAEAHGEPRRKIYQQALQIAREDQG
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]