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The map label for this gene is ycjP [C]

Identifier: 99080270

GI number: 99080270

Start: 441173

End: 442003

Strand: Reverse

Name: ycjP [C]

Synonym: TM1040_0429

Alternate gene names: 99080270

Gene position: 442003-441173 (Counterclockwise)

Preceding gene: 99080271

Following gene: 99080269

Centisome position: 13.81

GC content: 56.92

Gene sequence:

>831_bases
ATGGCACGTTCCGTGACCCAACACCGAAAAGCGATCAATACCATCGCCGCCTGGTCGGTTGGCCTGTTGATCTTCTTCCC
GATCCTCTGGACGATCCTGACCTCCTTCAAGACCGAGGCGCAGGCAATCAACGACCCGCCGCTGTTCCTCGCATTTGACT
GGACGCTGGAAAACTACGCCGTCGTACAGGAGCGCTCCAACTACCTGCGTTTCTTGTGGAACTCCATCGCGATTGCCGGG
GGCTCAACCCTGCTTGGCATCCTAATCGCGGTGCCCGCAGCCTGGTCGATGGCCTTTGTGCCCTCCAAGCGCACCAAGGA
TATCCTGTTGTGGATGCTCTCAACAAAAATGCTGCCCGCCGTAGGCGTGCTGTACCCGATCTATCTGATCTTTATCCGCC
TCGGACTGCTCGACAGTCGTACGGGTCTGATTGTGGTGCTGATGCTGTGCAATCTGCCGATCATCATCTGGATGCTCTAT
ACCTACTTCAAGGAAATCCCCGGCGAAATTCTCGAGGCAGCGCGGATGGATGGCGCCACCCTGAAAGAAGAAATTCTTTA
TGTTCTGACACCTATGGCCATTCCAGGCATCGCATCAACCGTGCTGCTCAACATCATCCTCGCCTGGAACGAGGCCTTCT
GGACCCTGAACCTGACGGCCGCCAAAGCGGCTCCGCTCACGGCCTTTATCGCCAGCTACTCCAGTCCCGAAGGGCTGTTT
TACGCAAAACTCAGCGCGGCCTCCACCATGGCCATCGCGCCGATCCTGATCCTTGGCTGGTTCAGCCAGAAACAACTTGT
GCGCGGCCTGACCTTTGGCGCTGTGAAATAA

Upstream 100 bases:

>100_bases
CGCTGGCGGTGTCTATGCCATCATCCTTGCCAATATTGTTGCCGCATTCCTGATGCGCATCGTCGGCAAGAACCTCGACG
CATAAGGGAGGAGACCCGAA

Downstream 100 bases:

>100_bases
GGACGACGACTTATGGGACGTATTACACTCGACAAAGTCACCAAAAGCTTTGGGGCGACAGAAGTTATCCCGCCACTGGA
CCTGACGATTGAGGACGGTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MARSVTQHRKAINTIAAWSVGLLIFFPILWTILTSFKTEAQAINDPPLFLAFDWTLENYAVVQERSNYLRFLWNSIAIAG
GSTLLGILIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYLIFIRLGLLDSRTGLIVVLMLCNLPIIIWMLY
TYFKEIPGEILEAARMDGATLKEEILYVLTPMAIPGIASTVLLNIILAWNEAFWTLNLTAAKAAPLTAFIASYSSPEGLF
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Sequences:

>Translated_276_residues
MARSVTQHRKAINTIAAWSVGLLIFFPILWTILTSFKTEAQAINDPPLFLAFDWTLENYAVVQERSNYLRFLWNSIAIAG
GSTLLGILIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYLIFIRLGLLDSRTGLIVVLMLCNLPIIIWMLY
TYFKEIPGEILEAARMDGATLKEEILYVLTPMAIPGIASTVLLNIILAWNEAFWTLNLTAAKAAPLTAFIASYSSPEGLF
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
>Mature_275_residues
ARSVTQHRKAINTIAAWSVGLLIFFPILWTILTSFKTEAQAINDPPLFLAFDWTLENYAVVQERSNYLRFLWNSIAIAGG
STLLGILIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYLIFIRLGLLDSRTGLIVVLMLCNLPIIIWMLYT
YFKEIPGEILEAARMDGATLKEEILYVLTPMAIPGIASTVLLNIILAWNEAFWTLNLTAAKAAPLTAFIASYSSPEGLFY
AKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=278, Percent_Identity=27.3381294964029, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=31.1627906976744, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30579; Mature: 30448

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSVTQHRKAINTIAAWSVGLLIFFPILWTILTSFKTEAQAINDPPLFLAFDWTLENYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
VVQERSNYLRFLWNSIAIAGGSTLLGILIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH
VGVLYPIYLIFIRLGLLDSRTGLIVVLMLCNLPIIIWMLYTYFKEIPGEILEAARMDGAT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LKEEILYVLTPMAIPGIASTVLLNIILAWNEAFWTLNLTAAKAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEE
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARSVTQHRKAINTIAAWSVGLLIFFPILWTILTSFKTEAQAINDPPLFLAFDWTLENYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
VVQERSNYLRFLWNSIAIAGGSTLLGILIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH
VGVLYPIYLIFIRLGLLDSRTGLIVVLMLCNLPIIIWMLYTYFKEIPGEILEAARMDGAT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LKEEILYVLTPMAIPGIASTVLLNIILAWNEAFWTLNLTAAKAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEE
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]