| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is pgi
Identifier: 99080219
GI number: 99080219
Start: 388010
End: 389620
Strand: Reverse
Name: pgi
Synonym: TM1040_0378
Alternate gene names: 99080219
Gene position: 389620-388010 (Counterclockwise)
Preceding gene: 99080220
Following gene: 99080218
Centisome position: 12.17
GC content: 61.82
Gene sequence:
>1611_bases ATGAGTGACATTTGGCAGCAACTCTCAGCCCATCGCGCCGCGACCGAGGCCACCCCGCTCACCGACTACTTTGCTCAGGA CGCCGACAGGTTCGCGCGCTACTCCGCCTCTGCCGGTGAGATGTTGCTGGACTATTCCAAGACCGCGCTGGACGATACCG CGCGCGACCTTTTGGTCCAACTGGCCGAAAGCGTGGATCTGAAGTCGAGGATCGCGGCGATGATGTCGGGTGCCAAGATC AATTCAACCGAGAACCGCGCCGTGCTGCACACGGCCCTGCGTGCGCCAAAGGATGCAGTCATTGAGGTGGACGGCGAAAA CGTCGTCCCTGGCATCCAAAAGGTCCTGGCGCAGATGGGCGCCTTTGCCACCGCCCTGCGGGAGGGCAGCTACCAGACCA AGACCGGCACGGCCTTCACCGATGTTGTGAACATCGGCATCGGCGGCTCTGACCTTGGCCCGGTGATGGCCACGCTGGCG CTTGCCCCCTATCACGACGGGCCCGCCTGTCATTTTGTGTCCAACGTGGATGGCGCGCATATCCATGACGTGCTGGCCGG TCTGAACCCGGAAACCACTCTGGTCGTGATCGCCTCCAAAACCTTTACCACCATCGAGACGATGACCAACGCCGAGACCG CTATCCAGTGGCTCAAAGGTGCGCTGGGTGAGGATGTTTCGACCCATCTGGCGGCCGTGTCGACAGCACTGGACAAAACG GCCGCGATGGGCATCCCAGACGCCCGTGTCTTTGGCTTTGCCGATTGGGTGGGCGGACGCTACTCCATGTGGGGACCGAT CGGTCTGCCGATCATGATTGCCGTGGGGCCGGAGTCCTTTGGCGAATTCCTCGCAGGCGCTGCCGCGATGGATCAGCATT TCCGTGATGCGCCGCTGATGGAAAACCTGCCTGCGCTGCTCGGGCTCATTGGCGTCTGGCACAACAACATCTGCGGTTAT GGTTCGCGCGCGGTTCTGCCCTATGATCAGCGTCTGTCCCGCCTGCCCGCCTATCTTCAGCAGCTTGATATGGAGAGCAA CGGCAAATCCGTCGCGCTCGATGGCAGCCCCCTGCCCCGCGCCTCCGGTCCCGTGGTTTGGGGCGAGCCCGGCACCAACG GCCAGCACGCGTTTTACCAGTTGTTGCATCAGGGTACGCAGGTGATCCCCACCGAGTTCCTGATTGCCGCAACGGGTCAC GAGCCCGAGCTGGCCCATCAGCACAATCTTCTGAAAGCCAACTGCCTTGCTCAATCCGAAGCGCTGATGCTGGGGCGATC CTGGGATGAGGCGCGCGAGATTGCCATCGCGCGCGGATTTGACGGGGTGGATGCCGACCGTATGGCCGGGCATCTGAGCT TTCCCGGCAACCGTCCCTCGGTGACCCTCGCCTACCCCAAACTGACGCCATTCGTATTTGGTCAGATCGTTGCTCTCTAC GAACATCGTGTGTTCACCGAAGGCGTGATCTGGGGGATCAACTCCTTTGATCAATGGGGGGTTGAGCTGGGCAAAGAACT GGCGACCCGCCTTCTGCCGATGGTCGAAGGGGCAGATGCATCCCAAAAAGACGCCTCCACCCGCGGCCTGCTCGCCAAAC TCTCCACCTGA
Upstream 100 bases:
>100_bases AGCATTGTTAGCGCTAACTTGGCATATAGGCCGCGAACCGGATCTCGCAGGCGCGCCACCAGCGCCGCCTATTCGATGCG AATAACGAGGAGCCCACTTG
Downstream 100 bases:
>100_bases CCGTCAACCAAGAGGAAGACACCCATGGTATCCCGCGTCATCCCCGTCGACAGTTTCGACTTCGTCTTGTTCGGCGCCAC CGGCGACCTTGCCCGACGCA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSDIWQQLSAHRAATEATPLTDYFAQDADRFARYSASAGEMLLDYSKTALDDTARDLLVQLAESVDLKSRIAAMMSGAKI NSTENRAVLHTALRAPKDAVIEVDGENVVPGIQKVLAQMGAFATALREGSYQTKTGTAFTDVVNIGIGGSDLGPVMATLA LAPYHDGPACHFVSNVDGAHIHDVLAGLNPETTLVVIASKTFTTIETMTNAETAIQWLKGALGEDVSTHLAAVSTALDKT AAMGIPDARVFGFADWVGGRYSMWGPIGLPIMIAVGPESFGEFLAGAAAMDQHFRDAPLMENLPALLGLIGVWHNNICGY GSRAVLPYDQRLSRLPAYLQQLDMESNGKSVALDGSPLPRASGPVVWGEPGTNGQHAFYQLLHQGTQVIPTEFLIAATGH EPELAHQHNLLKANCLAQSEALMLGRSWDEAREIAIARGFDGVDADRMAGHLSFPGNRPSVTLAYPKLTPFVFGQIVALY EHRVFTEGVIWGINSFDQWGVELGKELATRLLPMVEGADASQKDASTRGLLAKLST
Sequences:
>Translated_536_residues MSDIWQQLSAHRAATEATPLTDYFAQDADRFARYSASAGEMLLDYSKTALDDTARDLLVQLAESVDLKSRIAAMMSGAKI NSTENRAVLHTALRAPKDAVIEVDGENVVPGIQKVLAQMGAFATALREGSYQTKTGTAFTDVVNIGIGGSDLGPVMATLA LAPYHDGPACHFVSNVDGAHIHDVLAGLNPETTLVVIASKTFTTIETMTNAETAIQWLKGALGEDVSTHLAAVSTALDKT AAMGIPDARVFGFADWVGGRYSMWGPIGLPIMIAVGPESFGEFLAGAAAMDQHFRDAPLMENLPALLGLIGVWHNNICGY GSRAVLPYDQRLSRLPAYLQQLDMESNGKSVALDGSPLPRASGPVVWGEPGTNGQHAFYQLLHQGTQVIPTEFLIAATGH EPELAHQHNLLKANCLAQSEALMLGRSWDEAREIAIARGFDGVDADRMAGHLSFPGNRPSVTLAYPKLTPFVFGQIVALY EHRVFTEGVIWGINSFDQWGVELGKELATRLLPMVEGADASQKDASTRGLLAKLST >Mature_535_residues SDIWQQLSAHRAATEATPLTDYFAQDADRFARYSASAGEMLLDYSKTALDDTARDLLVQLAESVDLKSRIAAMMSGAKIN STENRAVLHTALRAPKDAVIEVDGENVVPGIQKVLAQMGAFATALREGSYQTKTGTAFTDVVNIGIGGSDLGPVMATLAL APYHDGPACHFVSNVDGAHIHDVLAGLNPETTLVVIASKTFTTIETMTNAETAIQWLKGALGEDVSTHLAAVSTALDKTA AMGIPDARVFGFADWVGGRYSMWGPIGLPIMIAVGPESFGEFLAGAAAMDQHFRDAPLMENLPALLGLIGVWHNNICGYG SRAVLPYDQRLSRLPAYLQQLDMESNGKSVALDGSPLPRASGPVVWGEPGTNGQHAFYQLLHQGTQVIPTEFLIAATGHE PELAHQHNLLKANCLAQSEALMLGRSWDEAREIAIARGFDGVDADRMAGHLSFPGNRPSVTLAYPKLTPFVFGQIVALYE HRVFTEGVIWGINSFDQWGVELGKELATRLLPMVEGADASQKDASTRGLLAKLST
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=530, Percent_Identity=49.4339622641509, Blast_Score=513, Evalue=1e-145, Organism=Homo sapiens, GI296080693, Length=530, Percent_Identity=46.4150943396226, Blast_Score=464, Evalue=1e-131, Organism=Escherichia coli, GI1790457, Length=533, Percent_Identity=48.968105065666, Blast_Score=522, Evalue=1e-149, Organism=Caenorhabditis elegans, GI71996708, Length=535, Percent_Identity=46.7289719626168, Blast_Score=489, Evalue=1e-138, Organism=Caenorhabditis elegans, GI71996703, Length=535, Percent_Identity=46.7289719626168, Blast_Score=488, Evalue=1e-138, Organism=Saccharomyces cerevisiae, GI6319673, Length=541, Percent_Identity=44.547134935305, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24651916, Length=521, Percent_Identity=48.9443378119002, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI24651914, Length=521, Percent_Identity=48.9443378119002, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI17737445, Length=521, Percent_Identity=48.9443378119002, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_SILST (Q1GJQ5)
Other databases:
- EMBL: CP000377 - RefSeq: YP_612373.1 - ProteinModelPortal: Q1GJQ5 - SMR: Q1GJQ5 - STRING: Q1GJQ5 - GeneID: 4078611 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_0378 - NMPDR: fig|292414.1.peg.2445 - eggNOG: COG0166 - HOGENOM: HBG352954 - OMA: GPKIVSQ - PhylomeDB: Q1GJQ5 - BioCyc: SSP292414:TM1040_0378-MONOMER - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 57392; Mature: 57261
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 345-345 ACT_SITE 376-376 ACT_SITE 505-505
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIWQQLSAHRAATEATPLTDYFAQDADRFARYSASAGEMLLDYSKTALDDTARDLLVQ CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LAESVDLKSRIAAMMSGAKINSTENRAVLHTALRAPKDAVIEVDGENVVPGIQKVLAQMG HHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH AFATALREGSYQTKTGTAFTDVVNIGIGGSDLGPVMATLALAPYHDGPACHFVSNVDGAH HHHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHH IHDVLAGLNPETTLVVIASKTFTTIETMTNAETAIQWLKGALGEDVSTHLAAVSTALDKT HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAMGIPDARVFGFADWVGGRYSMWGPIGLPIMIAVGPESFGEFLAGAAAMDQHFRDAPLM HHCCCCCHHHEEHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHH ENLPALLGLIGVWHNNICGYGSRAVLPYDQRLSRLPAYLQQLDMESNGKSVALDGSPLPR HHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC ASGPVVWGEPGTNGQHAFYQLLHQGTQVIPTEFLIAATGHEPELAHQHNLLKANCLAQSE CCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH ALMLGRSWDEAREIAIARGFDGVDADRMAGHLSFPGNRPSVTLAYPKLTPFVFGQIVALY HHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH EHRVFTEGVIWGINSFDQWGVELGKELATRLLPMVEGADASQKDASTRGLLAKLST HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SDIWQQLSAHRAATEATPLTDYFAQDADRFARYSASAGEMLLDYSKTALDDTARDLLVQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LAESVDLKSRIAAMMSGAKINSTENRAVLHTALRAPKDAVIEVDGENVVPGIQKVLAQMG HHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH AFATALREGSYQTKTGTAFTDVVNIGIGGSDLGPVMATLALAPYHDGPACHFVSNVDGAH HHHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHH IHDVLAGLNPETTLVVIASKTFTTIETMTNAETAIQWLKGALGEDVSTHLAAVSTALDKT HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAMGIPDARVFGFADWVGGRYSMWGPIGLPIMIAVGPESFGEFLAGAAAMDQHFRDAPLM HHCCCCCHHHEEHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHH ENLPALLGLIGVWHNNICGYGSRAVLPYDQRLSRLPAYLQQLDMESNGKSVALDGSPLPR HHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC ASGPVVWGEPGTNGQHAFYQLLHQGTQVIPTEFLIAATGHEPELAHQHNLLKANCLAQSE CCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHH ALMLGRSWDEAREIAIARGFDGVDADRMAGHLSFPGNRPSVTLAYPKLTPFVFGQIVALY HHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH EHRVFTEGVIWGINSFDQWGVELGKELATRLLPMVEGADASQKDASTRGLLAKLST HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA