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The map label for this gene is 99080181

Identifier: 99080181

GI number: 99080181

Start: 344893

End: 345972

Strand: Direct

Name: 99080181

Synonym: TM1040_0340

Alternate gene names: NA

Gene position: 344893-345972 (Clockwise)

Preceding gene: 99080180

Following gene: 99080182

Centisome position: 10.77

GC content: 60.28

Gene sequence:

>1080_bases
ATGAGAAGATTGATCGCGGCTGCGGTGCTGGGCGTGTCTGCGCTCTGGGCGCAGGCAAGTGCAGCGCAAACCTGTGGTGG
CATGTACACGGTTCAGCCCGGAGACAGCCTCTCGGTGATTGCGGATCGGCTCTATAAGAATGCGGGCATGTGGACTGCGA
TCCACAACCGCAACATAGCCGCCATCGGCCCCAAACCCGGATCGATCCGGGTGGGGATGCGGCTGGAGATCACCTGCCTC
AATGGGTTGCCCGTTGGTCTTGAAGGCGGGCGCGCACTGAGTGCGTCCGCCCCGACAGAGGCGACGCCGGTCCAGATCGT
CGCAGGCAATGCCACGGTGCGCCAGAAGATCAACCTTCTGACGGGGGATGATTTTGAACCCTTTACCGGAAAGTCCCTGC
ACAACGGCGGGCTGCTGACGGATCTGGTGAATGCGGCCATGACCGAGGCCAACCCCGCGCAGGGGTTTGCGATCCATTGG
GTCGACCATTGGGCGGCGCATTTCGACCCGCTCTTGTCCAATGCGCTCCTCGACATCGGGTTTCCGTGGTACAAACCCAA
TTGCGCCGAGTTGCCAGACAACTACCGCTGTCAGAACCTGCTGTTCTCTGACCCGCTTTTTGAGACCTTGACCCTGATGT
TCGCGGATGCGGCGCGCCCGGTATCTTTTGGCAGCGACGAGGACCTCTACGGCAAATCGATCTGTCGCCCCAAAGGCTAT
GATACCTCTATTTTCAACGAAAACGGCCGCAACTGGCTGCGCGAGGACAAGATCACGCTGGTGGTCGGCGCAACGCCCGG
TGACTGCTTTGACATGGTGCTTGAGGGCAAGGCCGACGGGGTGGTGCTGAATGAATTCACCGGTCGCGACAAGATGAAGG
AAATGGGGATCGTGGAGCGCATCCAGGTGGTGCCACAACCGATTTCGATTCAGTCGCACCATGTGGTTGTCCATAAGTCC
CACCCGCAGGCCCAGGAGCTGTTGGCAATTGTAAACACCGGGCTGCGCGGGATCCGGGAGGATGGCTCCTATCAGGCCAT
CGTCGAGGACCATCTGGCACGCGTCTGGGCCGGATTTTGA

Upstream 100 bases:

>100_bases
TTCCAGTGCGACTGGCGACGCGGTAGCAAGGCAAAGATCAAGAGCGAGCGCCAAGCTCGACAGGACGATACCATCTAAAA
TTGTTCTTCAGGGGGACCGA

Downstream 100 bases:

>100_bases
CGGGGGCGAGGATGCAACGCGATTTGGCTTTCTGGATCGGGCGCCTGCTTTTGGTGGTTGGGCTGCTGTCGGGGGTGGCC
CCCAGTGCTGCCCGGGCGAT

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRRLIAAAVLGVSALWAQASAAQTCGGMYTVQPGDSLSVIADRLYKNAGMWTAIHNRNIAAIGPKPGSIRVGMRLEITCL
NGLPVGLEGGRALSASAPTEATPVQIVAGNATVRQKINLLTGDDFEPFTGKSLHNGGLLTDLVNAAMTEANPAQGFAIHW
VDHWAAHFDPLLSNALLDIGFPWYKPNCAELPDNYRCQNLLFSDPLFETLTLMFADAARPVSFGSDEDLYGKSICRPKGY
DTSIFNENGRNWLREDKITLVVGATPGDCFDMVLEGKADGVVLNEFTGRDKMKEMGIVERIQVVPQPISIQSHHVVVHKS
HPQAQELLAIVNTGLRGIREDGSYQAIVEDHLARVWAGF

Sequences:

>Translated_359_residues
MRRLIAAAVLGVSALWAQASAAQTCGGMYTVQPGDSLSVIADRLYKNAGMWTAIHNRNIAAIGPKPGSIRVGMRLEITCL
NGLPVGLEGGRALSASAPTEATPVQIVAGNATVRQKINLLTGDDFEPFTGKSLHNGGLLTDLVNAAMTEANPAQGFAIHW
VDHWAAHFDPLLSNALLDIGFPWYKPNCAELPDNYRCQNLLFSDPLFETLTLMFADAARPVSFGSDEDLYGKSICRPKGY
DTSIFNENGRNWLREDKITLVVGATPGDCFDMVLEGKADGVVLNEFTGRDKMKEMGIVERIQVVPQPISIQSHHVVVHKS
HPQAQELLAIVNTGLRGIREDGSYQAIVEDHLARVWAGF
>Mature_359_residues
MRRLIAAAVLGVSALWAQASAAQTCGGMYTVQPGDSLSVIADRLYKNAGMWTAIHNRNIAAIGPKPGSIRVGMRLEITCL
NGLPVGLEGGRALSASAPTEATPVQIVAGNATVRQKINLLTGDDFEPFTGKSLHNGGLLTDLVNAAMTEANPAQGFAIHW
VDHWAAHFDPLLSNALLDIGFPWYKPNCAELPDNYRCQNLLFSDPLFETLTLMFADAARPVSFGSDEDLYGKSICRPKGY
DTSIFNENGRNWLREDKITLVVGATPGDCFDMVLEGKADGVVLNEFTGRDKMKEMGIVERIQVVPQPISIQSHHVVVHKS
HPQAQELLAIVNTGLRGIREDGSYQAIVEDHLARVWAGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38960; Mature: 38960

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLIAAAVLGVSALWAQASAAQTCGGMYTVQPGDSLSVIADRLYKNAGMWTAIHNRNIA
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCEE
AIGPKPGSIRVGMRLEITCLNGLPVGLEGGRALSASAPTEATPVQIVAGNATVRQKINLL
EECCCCCCEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCEEEHEEEEE
TGDDFEPFTGKSLHNGGLLTDLVNAAMTEANPAQGFAIHWVDHWAAHFDPLLSNALLDIG
ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
FPWYKPNCAELPDNYRCQNLLFSDPLFETLTLMFADAARPVSFGSDEDLYGKSICRPKGY
CCCCCCCHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC
DTSIFNENGRNWLREDKITLVVGATPGDCFDMVLEGKADGVVLNEFTGRDKMKEMGIVER
CCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHH
IQVVPQPISIQSHHVVVHKSHPQAQELLAIVNTGLRGIREDGSYQAIVEDHLARVWAGF
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRLIAAAVLGVSALWAQASAAQTCGGMYTVQPGDSLSVIADRLYKNAGMWTAIHNRNIA
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCEE
AIGPKPGSIRVGMRLEITCLNGLPVGLEGGRALSASAPTEATPVQIVAGNATVRQKINLL
EECCCCCCEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCEEEHEEEEE
TGDDFEPFTGKSLHNGGLLTDLVNAAMTEANPAQGFAIHWVDHWAAHFDPLLSNALLDIG
ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
FPWYKPNCAELPDNYRCQNLLFSDPLFETLTLMFADAARPVSFGSDEDLYGKSICRPKGY
CCCCCCCHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC
DTSIFNENGRNWLREDKITLVVGATPGDCFDMVLEGKADGVVLNEFTGRDKMKEMGIVER
CCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHH
IQVVPQPISIQSHHVVVHKSHPQAQELLAIVNTGLRGIREDGSYQAIVEDHLARVWAGF
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA