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The map label for this gene is 99080126

Identifier: 99080126

GI number: 99080126

Start: 289710

End: 291107

Strand: Reverse

Name: 99080126

Synonym: TM1040_0285

Alternate gene names: NA

Gene position: 291107-289710 (Counterclockwise)

Preceding gene: 99080130

Following gene: 99080124

Centisome position: 9.09

GC content: 64.16

Gene sequence:

>1398_bases
ATGGAACAGGCCAAGTTTCTCAAGGGCAACCTGCTGCGCCATATCACGGTGATGTCGCTGACCTCATCGGTGGGGTTGAT
GGCGGTATTTGCGGTGGATTTCATCGACATGGTGTTCATCGCCATGCTCGGCAAGGAAGAGCTGGCCGCGGCGGTGGGCT
ATGCGGGCGCCATCCTGTTTTTCACCACCTCCTTCAACATCGGGATCGCCATTGCCGCGGGCGCCCTTGTGGCGCGGGCG
CTGGGGGCCGGGGAGTCCGTTCTGGCCCGCCAGCAAGCCTCTAACGCGTTGATCTGGGGCGGGATTTTCTCAGCCATATT
TGCGCTGGTGATCTGGTTCAACCTCGCCTCGCTGGTGGCGCTTTTGGGGGCAAAGGGGCGCGCGCTCGATCTGGCGGTGG
CCTATCTGCAGATCATCGTGCCGACGCTGCCGCTCTTGCTGATGGGGATGGCCGGAGGGGCGATCCTGCGCGCCCATGGC
GATGCCCGACGCGCCATGATGGCAACCATTGCAGGCGGCGTGGTCAATGCAGCGCTCGACCCGATCCTGATCTTCGGCTT
CGATCTGGAGCTGATCGGTGCGGCCTGGGCCAGTGCCGCCTCGCGCGTTGCGGTTGCGGTCTTTGCCCTGGGGCCAATCT
TTCGCCACCACGGCGGATTGGAGCGCCCGCCGTTTGCGCTCTTTGTGGCCGGGCTTGCGCCGATCTTTGCGATTTCCTTT
CCCGCGATCCTGACACAGCTTGCCACGCCCGTGGGACAGGCCTTTGTCACCCGCGCGATGGCGGAGTTTGGTGAGGAGGC
CGTGGCGGGCATGGCCGTGATTGCGCGGATGTCACCGCTGGCCTTTGGCACCATCTTTGCGCTCTCGGGGGCGATTGGCC
CTATCGTGGGGCAGAACTACGGGGCGGGGAATTTTGACCGCGTGCGGCGCGCGTTCTGGGACGCGCTCCTGTTCACGGGG
CTCTTTGTGGTGGCCGTGACCGCGATCCTCTTTGTGTTGCGCGCGCCCATTGCGGCGCTGTTTGATGCGCAAGGGACCGC
GCTCTCGCTGATCTACCTCTTTTGCGGCCCGCTTGCGCTGGCGTTTTTCTTCAACGGGGCGATTTTTGTGGCCAATGCCA
GCTTTAACAACCTCGGCCATCCGTTTCATTCCACATGGCTTAACTGGGGGCGGCATACCATCGGGACCATTCCTCTGGTC
TGGATCGGGGCGCATTTCTTTGGCGCCCCGGGCGCGCTGATCGGCCAGGCCGTGGGCGGCGTGATTTTTGGGCTTTTTGC
GATCTGGCTTGCACGGCGGGTGATCGCAGAGGTCGAGGCGCGCGGCGGCGCCCCCAAGGGTCCCGGCCTGTTCCAGCGTC
AGGCGCGCCAGATCATCCTGGCCTTCAGTCGTCGCTAG

Upstream 100 bases:

>100_bases
TCAAAACACAAGGCGCAGGGTTTATACTTCTGTGTCAGGCGCTTAGTTAAGGGTGGCGGAGGCTCCGCACCGAGTCCAAC
CCGATCCGAGGAGATCTCCG

Downstream 100 bases:

>100_bases
CGCCCTTTGGGGCCGCGCGCCCGTATCCGGGGCGGCCCGTGCCGCTTTGGGCAACGTCAAAGTTCCACACGATGCAGAGG
TTGGTGAACATCGCCCCGAC

Product: MATE efflux family protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MEQAKFLKGNLLRHITVMSLTSSVGLMAVFAVDFIDMVFIAMLGKEELAAAVGYAGAILFFTTSFNIGIAIAAGALVARA
LGAGESVLARQQASNALIWGGIFSAIFALVIWFNLASLVALLGAKGRALDLAVAYLQIIVPTLPLLLMGMAGGAILRAHG
DARRAMMATIAGGVVNAALDPILIFGFDLELIGAAWASAASRVAVAVFALGPIFRHHGGLERPPFALFVAGLAPIFAISF
PAILTQLATPVGQAFVTRAMAEFGEEAVAGMAVIARMSPLAFGTIFALSGAIGPIVGQNYGAGNFDRVRRAFWDALLFTG
LFVVAVTAILFVLRAPIAALFDAQGTALSLIYLFCGPLALAFFFNGAIFVANASFNNLGHPFHSTWLNWGRHTIGTIPLV
WIGAHFFGAPGALIGQAVGGVIFGLFAIWLARRVIAEVEARGGAPKGPGLFQRQARQIILAFSRR

Sequences:

>Translated_465_residues
MEQAKFLKGNLLRHITVMSLTSSVGLMAVFAVDFIDMVFIAMLGKEELAAAVGYAGAILFFTTSFNIGIAIAAGALVARA
LGAGESVLARQQASNALIWGGIFSAIFALVIWFNLASLVALLGAKGRALDLAVAYLQIIVPTLPLLLMGMAGGAILRAHG
DARRAMMATIAGGVVNAALDPILIFGFDLELIGAAWASAASRVAVAVFALGPIFRHHGGLERPPFALFVAGLAPIFAISF
PAILTQLATPVGQAFVTRAMAEFGEEAVAGMAVIARMSPLAFGTIFALSGAIGPIVGQNYGAGNFDRVRRAFWDALLFTG
LFVVAVTAILFVLRAPIAALFDAQGTALSLIYLFCGPLALAFFFNGAIFVANASFNNLGHPFHSTWLNWGRHTIGTIPLV
WIGAHFFGAPGALIGQAVGGVIFGLFAIWLARRVIAEVEARGGAPKGPGLFQRQARQIILAFSRR
>Mature_465_residues
MEQAKFLKGNLLRHITVMSLTSSVGLMAVFAVDFIDMVFIAMLGKEELAAAVGYAGAILFFTTSFNIGIAIAAGALVARA
LGAGESVLARQQASNALIWGGIFSAIFALVIWFNLASLVALLGAKGRALDLAVAYLQIIVPTLPLLLMGMAGGAILRAHG
DARRAMMATIAGGVVNAALDPILIFGFDLELIGAAWASAASRVAVAVFALGPIFRHHGGLERPPFALFVAGLAPIFAISF
PAILTQLATPVGQAFVTRAMAEFGEEAVAGMAVIARMSPLAFGTIFALSGAIGPIVGQNYGAGNFDRVRRAFWDALLFTG
LFVVAVTAILFVLRAPIAALFDAQGTALSLIYLFCGPLALAFFFNGAIFVANASFNNLGHPFHSTWLNWGRHTIGTIPLV
WIGAHFFGAPGALIGQAVGGVIFGLFAIWLARRVIAEVEARGGAPKGPGLFQRQARQIILAFSRR

Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48768; Mature: 48768

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAKFLKGNLLRHITVMSLTSSVGLMAVFAVDFIDMVFIAMLGKEELAAAVGYAGAILF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEE
FTTSFNIGIAIAAGALVARALGAGESVLARQQASNALIWGGIFSAIFALVIWFNLASLVA
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
LLGAKGRALDLAVAYLQIIVPTLPLLLMGMAGGAILRAHGDARRAMMATIAGGVVNAALD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHC
PILIFGFDLELIGAAWASAASRVAVAVFALGPIFRHHGGLERPPFALFVAGLAPIFAISF
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
PAILTQLATPVGQAFVTRAMAEFGEEAVAGMAVIARMSPLAFGTIFALSGAIGPIVGQNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
GAGNFDRVRRAFWDALLFTGLFVVAVTAILFVLRAPIAALFDAQGTALSLIYLFCGPLAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AFFFNGAIFVANASFNNLGHPFHSTWLNWGRHTIGTIPLVWIGAHFFGAPGALIGQAVGG
HHHHCCEEEEEECCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
VIFGLFAIWLARRVIAEVEARGGAPKGPGLFQRQARQIILAFSRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQAKFLKGNLLRHITVMSLTSSVGLMAVFAVDFIDMVFIAMLGKEELAAAVGYAGAILF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEE
FTTSFNIGIAIAAGALVARALGAGESVLARQQASNALIWGGIFSAIFALVIWFNLASLVA
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
LLGAKGRALDLAVAYLQIIVPTLPLLLMGMAGGAILRAHGDARRAMMATIAGGVVNAALD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHC
PILIFGFDLELIGAAWASAASRVAVAVFALGPIFRHHGGLERPPFALFVAGLAPIFAISF
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
PAILTQLATPVGQAFVTRAMAEFGEEAVAGMAVIARMSPLAFGTIFALSGAIGPIVGQNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
GAGNFDRVRRAFWDALLFTGLFVVAVTAILFVLRAPIAALFDAQGTALSLIYLFCGPLAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AFFFNGAIFVANASFNNLGHPFHSTWLNWGRHTIGTIPLVWIGAHFFGAPGALIGQAVGG
HHHHCCEEEEEECCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
VIFGLFAIWLARRVIAEVEARGGAPKGPGLFQRQARQIILAFSRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2377619 [H]