The gene/protein map for NC_006138 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080101

Identifier: 99080101

GI number: 99080101

Start: 273804

End: 274844

Strand: Direct

Name: 99080101

Synonym: TM1040_0260

Alternate gene names: NA

Gene position: 273804-274844 (Clockwise)

Preceding gene: 99080100

Following gene: 99080103

Centisome position: 8.55

GC content: 62.44

Gene sequence:

>1041_bases
ATGGCGCGGCGTTCCCCTTTTGAAATTGGTGGTTTCCATATTCCGCCCGGCACCCGGCGCACCGTTGATCTGCCGGTGAG
CGTGCTGTCGGATCACACACCGGTCAATATGTCGGCGCATGTGATCCACGGGTCCGAGGATGGCCCGACGCTCTTTGTGT
CTGCGGCTATCCACGGCGATGAGGTGATCGGAGTGGAGATCGCCCGCCGCCTGTTGCGCAGCCGTCAGTTTGCGCGCCTG
CGGGGCACCCTGATCGTGGTGCCCATCGTCAATACCTTCGGGTTTCTCAATCATTCCCGCTATTTGCCGGATCGACGCGA
CCTCAATCGCTGCTTTCCCGGCAGCGAGGGAGGCTCGCTCGCCAGCCGCCTCGCGCATCTTTTTATGACAGAGATCGTGG
CGCGCTCGGATCTGGGGATTGACCTGCACTCCGCCGCGATCCACCGCACCAACCTGCCGCAGATCCGTGTCTCACCCAAG
GCTCAGGATACGCTTGCCTACGCCGATGCCTTTGGCGCGCCGGTGGTGATCCGCTCGGGGCTGCGGGATGGCTCTCTGCG
CAAAGAGGCGCAAAAGGCCGGGGTCGATATTCTGCTCTACGAAGCGGGGGAGGGGTTGCGGTTTGACGAGCAATCCGCCC
GTGTTGGTGTCGCCGGGATTTTGCGCGTGATGCATGCGCTCGACATGATCCCCGAGGATGGCGTGCCACTGGCCGAAGGT
GTGCCGGTTCGCGCCGCGGACTCGGCGTGGGAACGTGCACCCGCCGGCGGATTGCTCCGTGCCTATAAAACCACTGGCGA
GATGGTCGAGGCCGGGGATGTGCTCGGGATCGTTGCCGACCCCTTTGGCGAAGAGGAAATGGAACTCACCGCAAGCCAGA
CGGGTCTTATCATCGGGCGCGCCAATATGCCCATTGTGAACGAGGGTGACGCGCTGTTTCACATCGCCAGCGTGAATTCC
GCCACCGCCGAACAACAGATCGAAACGCTCAACGCGCAGCTTGATGGCGCGGCGATGTTTGACGAGGATGAGATCATCTA
G

Upstream 100 bases:

>100_bases
GTCTCCTTCAATTACGCCTGGGCCTGATCGCGCGGGACAGATTGTAAAGCGCTGAAAAACCTGCATAGCTTCTCGGACAT
CCTGTCCGAGAGGCTTTTTT

Downstream 100 bases:

>100_bases
GCTGCTGAAGCGTCACAAGGCGCGTGCAAAGAGGCCGATGATCCGGGTCATCTTTTCGCGGGGCAGGGCGGTTGGTTCGA
CCTCAAAGCGGGCCATGTAG

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MARRSPFEIGGFHIPPGTRRTVDLPVSVLSDHTPVNMSAHVIHGSEDGPTLFVSAAIHGDEVIGVEIARRLLRSRQFARL
RGTLIVVPIVNTFGFLNHSRYLPDRRDLNRCFPGSEGGSLASRLAHLFMTEIVARSDLGIDLHSAAIHRTNLPQIRVSPK
AQDTLAYADAFGAPVVIRSGLRDGSLRKEAQKAGVDILLYEAGEGLRFDEQSARVGVAGILRVMHALDMIPEDGVPLAEG
VPVRAADSAWERAPAGGLLRAYKTTGEMVEAGDVLGIVADPFGEEEMELTASQTGLIIGRANMPIVNEGDALFHIASVNS
ATAEQQIETLNAQLDGAAMFDEDEII

Sequences:

>Translated_346_residues
MARRSPFEIGGFHIPPGTRRTVDLPVSVLSDHTPVNMSAHVIHGSEDGPTLFVSAAIHGDEVIGVEIARRLLRSRQFARL
RGTLIVVPIVNTFGFLNHSRYLPDRRDLNRCFPGSEGGSLASRLAHLFMTEIVARSDLGIDLHSAAIHRTNLPQIRVSPK
AQDTLAYADAFGAPVVIRSGLRDGSLRKEAQKAGVDILLYEAGEGLRFDEQSARVGVAGILRVMHALDMIPEDGVPLAEG
VPVRAADSAWERAPAGGLLRAYKTTGEMVEAGDVLGIVADPFGEEEMELTASQTGLIIGRANMPIVNEGDALFHIASVNS
ATAEQQIETLNAQLDGAAMFDEDEII
>Mature_345_residues
ARRSPFEIGGFHIPPGTRRTVDLPVSVLSDHTPVNMSAHVIHGSEDGPTLFVSAAIHGDEVIGVEIARRLLRSRQFARLR
GTLIVVPIVNTFGFLNHSRYLPDRRDLNRCFPGSEGGSLASRLAHLFMTEIVARSDLGIDLHSAAIHRTNLPQIRVSPKA
QDTLAYADAFGAPVVIRSGLRDGSLRKEAQKAGVDILLYEAGEGLRFDEQSARVGVAGILRVMHALDMIPEDGVPLAEGV
PVRAADSAWERAPAGGLLRAYKTTGEMVEAGDVLGIVADPFGEEEMELTASQTGLIIGRANMPIVNEGDALFHIASVNSA
TAEQQIETLNAQLDGAAMFDEDEII

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37206; Mature: 37075

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00132 CARBOXYPEPT_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRSPFEIGGFHIPPGTRRTVDLPVSVLSDHTPVNMSAHVIHGSEDGPTLFVSAAIHGD
CCCCCCCCCCCEECCCCCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEECCC
EVIGVEIARRLLRSRQFARLRGTLIVVPIVNTFGFLNHSRYLPDRRDLNRCFPGSEGGSL
EEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHH
ASRLAHLFMTEIVARSDLGIDLHSAAIHRTNLPQIRVSPKAQDTLAYADAFGAPVVIRSG
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCEEECC
LRDGSLRKEAQKAGVDILLYEAGEGLRFDEQSARVGVAGILRVMHALDMIPEDGVPLAEG
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VPVRAADSAWERAPAGGLLRAYKTTGEMVEAGDVLGIVADPFGEEEMELTASQTGLIIGR
CCCCCCCHHHHHCCCCCHHHHHHCCCCHHHCCCEEEEEECCCCCCHHEEECCCCEEEEEC
ANMPIVNEGDALFHIASVNSATAEQQIETLNAQLDGAAMFDEDEII
CCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure 
ARRSPFEIGGFHIPPGTRRTVDLPVSVLSDHTPVNMSAHVIHGSEDGPTLFVSAAIHGD
CCCCCCCCCCEECCCCCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEECCC
EVIGVEIARRLLRSRQFARLRGTLIVVPIVNTFGFLNHSRYLPDRRDLNRCFPGSEGGSL
EEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHH
ASRLAHLFMTEIVARSDLGIDLHSAAIHRTNLPQIRVSPKAQDTLAYADAFGAPVVIRSG
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCEEECC
LRDGSLRKEAQKAGVDILLYEAGEGLRFDEQSARVGVAGILRVMHALDMIPEDGVPLAEG
CCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VPVRAADSAWERAPAGGLLRAYKTTGEMVEAGDVLGIVADPFGEEEMELTASQTGLIIGR
CCCCCCCHHHHHCCCCCHHHHHHCCCCHHHCCCEEEEEECCCCCCHHEEECCCCEEEEEC
ANMPIVNEGDALFHIASVNSATAEQQIETLNAQLDGAAMFDEDEII
CCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA