Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080077

Identifier: 99080077

GI number: 99080077

Start: 256298

End: 257110

Strand: Direct

Name: 99080077

Synonym: TM1040_0236

Alternate gene names: NA

Gene position: 256298-257110 (Clockwise)

Preceding gene: 99080076

Following gene: 99080078

Centisome position: 8.01

GC content: 60.64

Gene sequence:

>813_bases
ATGGCGGCGACATTCAAGATGGTGGGCGTGATCCGCTTTTCGCTGCTGACGCCTACGTTCAATGCGGACCGCTATCCCGA
TCTGGAGGCGGCGGCCGCCGCGATTTTTGCGCCGGACCGCATGGCCCTGCGGCTGCATCTTTTTGAGACGCTCTGCCTGC
CCTCGCTTGTGCGGCAGAGCGATGCGGCGTTTCACCTGGTGGTAGCAACCTCAGATCGTCTTCCTGCGGTGATCTTGCAG
CACCTTCAGGCGCTTCTGGCGCCGCATGATCACATGCAACTGATCCAGTTTGCCCCCGAGAACCACTATCAAATCCTGAA
AGAGGCCTACCGCGCAGTGCCACAGCAGGGGGAGAGCCACCGCATCCTGTTTCGTCTTGATGATGACGACGCGCTGGATC
GTCACTATGTGGCGCGCTGCAAGCGTCTGGCGGCGGGACTGGTGCCATTGCAGACCGAAGCCGTCTCTCCCATCGCGCTT
GCGTTCAATCGCGGCTATTATCTGATCCGCGAAGAGGGTCAGCCGCCAGTGGTGATGGACAGTTGTGAACGTGCGCCGCT
CTCGGCGGGGACGGCGCTGGTGCAGCCGATCGCGGCGCGCGGAAATCCCTATCGTTACAATCACCGCAAGTTTGCGCAGC
ACTACACGCTCTATTCCGATATTTCCGTTCCATCCTTTGTGCGCACCGTGCATGGCGACAACCATTCGACCCCGGCGATG
ATGGGGCTCACGGCGCGACAGAGCGATGCGGAGATGGACGCCGATCTACAGCGCCATTTCGACCTCAGCCTGTCCGACCT
TAAAGCGATTTGA

Upstream 100 bases:

>100_bases
TGTTTCGCGCGCGGGGCCTTGCAGGTGTCGCGCCTAGGCTCTTGGCAAGCGCGCGGCGGCGTGATTTCTGTGAGGGAACC
AATCTGGGGAGGCGGGCGCG

Downstream 100 bases:

>100_bases
AATGACCACATCCCTCAGCCCGAACCAAAGAGGCGCGCTCTTGATGCTTGGGAGCATGGCGTTCTTCACCTTTAACGATA
CACTGGTCAAACTGGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAATFKMVGVIRFSLLTPTFNADRYPDLEAAAAAIFAPDRMALRLHLFETLCLPSLVRQSDAAFHLVVATSDRLPAVILQ
HLQALLAPHDHMQLIQFAPENHYQILKEAYRAVPQQGESHRILFRLDDDDALDRHYVARCKRLAAGLVPLQTEAVSPIAL
AFNRGYYLIREEGQPPVVMDSCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYTLYSDISVPSFVRTVHGDNHSTPAM
MGLTARQSDAEMDADLQRHFDLSLSDLKAI

Sequences:

>Translated_270_residues
MAATFKMVGVIRFSLLTPTFNADRYPDLEAAAAAIFAPDRMALRLHLFETLCLPSLVRQSDAAFHLVVATSDRLPAVILQ
HLQALLAPHDHMQLIQFAPENHYQILKEAYRAVPQQGESHRILFRLDDDDALDRHYVARCKRLAAGLVPLQTEAVSPIAL
AFNRGYYLIREEGQPPVVMDSCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYTLYSDISVPSFVRTVHGDNHSTPAM
MGLTARQSDAEMDADLQRHFDLSLSDLKAI
>Mature_269_residues
AATFKMVGVIRFSLLTPTFNADRYPDLEAAAAAIFAPDRMALRLHLFETLCLPSLVRQSDAAFHLVVATSDRLPAVILQH
LQALLAPHDHMQLIQFAPENHYQILKEAYRAVPQQGESHRILFRLDDDDALDRHYVARCKRLAAGLVPLQTEAVSPIALA
FNRGYYLIREEGQPPVVMDSCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYTLYSDISVPSFVRTVHGDNHSTPAMM
GLTARQSDAEMDADLQRHFDLSLSDLKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30213; Mature: 30082

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATFKMVGVIRFSLLTPTFNADRYPDLEAAAAAIFAPDRMALRLHLFETLCLPSLVRQS
CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DAAFHLVVATSDRLPAVILQHLQALLAPHDHMQLIQFAPENHYQILKEAYRAVPQQGESH
CCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
RILFRLDDDDALDRHYVARCKRLAAGLVPLQTEAVSPIALAFNRGYYLIREEGQPPVVMD
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCEEEEEECCCCCEEEC
SCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYTLYSDISVPSFVRTVHGDNHSTPAM
CCCCCCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHH
MGLTARQSDAEMDADLQRHFDLSLSDLKAI
EEEECCCCCCCCCHHHHHHCCCCHHHHHCC
>Mature Secondary Structure 
AATFKMVGVIRFSLLTPTFNADRYPDLEAAAAAIFAPDRMALRLHLFETLCLPSLVRQS
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DAAFHLVVATSDRLPAVILQHLQALLAPHDHMQLIQFAPENHYQILKEAYRAVPQQGESH
CCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
RILFRLDDDDALDRHYVARCKRLAAGLVPLQTEAVSPIALAFNRGYYLIREEGQPPVVMD
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCEEEEEECCCCCEEEC
SCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYTLYSDISVPSFVRTVHGDNHSTPAM
CCCCCCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHH
MGLTARQSDAEMDADLQRHFDLSLSDLKAI
EEEECCCCCCCCCHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA