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The map label for this gene is recR

Identifier: 99080005

GI number: 99080005

Start: 180902

End: 181501

Strand: Reverse

Name: recR

Synonym: TM1040_0164

Alternate gene names: 99080005

Gene position: 181501-180902 (Counterclockwise)

Preceding gene: 99080006

Following gene: 99080004

Centisome position: 5.67

GC content: 62.33

Gene sequence:

>600_bases
ATGGCTGCGCAGGACAACAGCGATATCGAGGCATTGATTGCATTGATGGCCAAGCTACCGGGGCTTGGCCCCCGCTCCGC
GCGCCGTGCTGTGTTGCACCTGATCCGCAAGCGTGCGCTTGTCCTGACCCCACTCGCCGATGCCATGAGCCGTGTTGCAG
AGACCGCGCGCGAGTGCCTCAACTGCGGCAACGTGGGCACGAGCGACATCTGCGCGCTCTGCGAGGATGAGACGCGCGCC
AATGGCGAACTCTGCGTGGTCGAGGATGTGGCGGACCTCTGGGCGATGGAGCGCGCTGGTGTGTTCAAGGGACGCTATCA
CGTCCTGGGCGGCACGTTGTCAGCACTTGATGCCATTGGCCCCGAAGATCTGCGCATCCCTCGCCTCGTGGATCGGGTCT
CCACCGAAGGGGTAAGTGAGGTGATCCTCGCACTCAACGCGACGATCGATGGCCAGACCACGGCGCATTACATCGCAGAT
CAACTGTCTGGACGTGTCAAACTCACGTCACTTGCGCAGGGTGTGCCCATCGGCGGCGAGCTGGACTATCTTGATGATGG
CACGATCTCGGCTGCATTGCGCGCCCGCAAGGAAATCTGA

Upstream 100 bases:

>100_bases
TTTCATGACCGCGCGCAGGCTCTGCCTGCAAATGCCAGCAGGGCTTGCACTTCACCGCGCAATGCGGCCTAGTTGAACAG
AAGCAGAACGGAGCAGAGGA

Downstream 100 bases:

>100_bases
GCTCGGGCCGACGCGACGCTTGCCCCCTTTGCAAACAGGGATTTGCAGCCTCCCGCGCGCAGATTTGAAATCCTGAGATC
GGCGCCCGATCTCAGGCGGC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECLNCGNVGTSDICALCEDETRA
NGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIAD
QLSGRVKLTSLAQGVPIGGELDYLDDGTISAALRARKEI

Sequences:

>Translated_199_residues
MAAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECLNCGNVGTSDICALCEDETRA
NGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIAD
QLSGRVKLTSLAQGVPIGGELDYLDDGTISAALRARKEI
>Mature_198_residues
AAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECLNCGNVGTSDICALCEDETRAN
GELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIGPEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQ
LSGRVKLTSLAQGVPIGGELDYLDDGTISAALRARKEI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=198, Percent_Identity=39.3939393939394, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SILST (Q1GKB9)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612159.1
- ProteinModelPortal:   Q1GKB9
- SMR:   Q1GKB9
- STRING:   Q1GKB9
- GeneID:   4078772
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0164
- NMPDR:   fig|292414.1.peg.2637
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q1GKB9
- ProtClustDB:   PRK00076
- BioCyc:   SSP292414:TM1040_0164-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21163; Mature: 21031

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECL
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCGNVGTSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIG
HCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCC
PEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSGRVKLTSLAQGVPIGGE
CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCC
LDYLDDGTISAALRARKEI
CCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECL
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCGNVGTSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIG
HCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCC
PEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSGRVKLTSLAQGVPIGGE
CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCC
LDYLDDGTISAALRARKEI
CCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA