| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is oprB
Identifier: 104780380
GI number:
Start: 1222501
End: 1223850
Strand: Reverse
Name: oprB
Synonym: PSEEN1171
Alternate gene names: NA
Gene position: NA
Preceding gene: 104780381
Following gene: 104780379
Centisome position: NA
GC content: NA
Gene sequence:
>1350_bases ATGTTCCAACTGCCCAAGACCCGCTACTCTGGCCTCGCCCTCGCCACCCTGCTCGGCAGCCTCTCCTCCCCCACCACCAG CGCCAGCGAAATGTTCGCCAAGGATTCCCCCTGGATGCTCGGTGACTGGGGTGGCACCCGCAGTGAACTGCTGGAGAAAG GCTACGACTTCACCCTCGGCTACACCGGCGAGATGGGCAGCAACCTGCACGGCGGCTACAGCCATGACCGCGCCGCGCGC TACAGCGACCAGTTCACCTTTGGTGTGAACATGGACCTGCAAAAGATCCTTGGCTGGCAGGACACCGAGTTCCAGCTGAC CGTCACCGAGCGTCATGGCGACAACATCAGCAACGACCGCATCAACGACCCGCGCGTCGGCGGCTTCACCTCGGCCCAGG AAGTCTGGGGGCGAGGCGAAACCTGGCGGCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTG AAATTCGGCCGTTTCGGTGAGGGCGAGGACTTCAACAGCTTCCCCTGCGACTTCCAGAACCTGGCTTTCTGCGGCTCACA GGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCACTGCGCGTGCGCTACAACCTGAACG ACGAACTCTACGCCCAGGTCGGCGTGTTCGAGCAGAACCCCTCCAACCTCGAAAGCAACAACGGCTTCAAGCTCAGCGGC AGCGGCACCCAAGGCGCGGTGATGCCGATCGAACTGGTCTGGAGCCCGCGGGTCAATGGCCTGAAAGGGGAATATCGCGC CGGCTACTACTACAGTAATGCCAAGGCACAGGATGTACTCAAGGACAGCCACGGCACGCCGGCCGCCATCAGCGGCGCCG CCTACCGCAGCAGCTCGAGCAAGCACGGCCTGTGGTTGGGCGCCCAGCAGCAGGTGACCTCGCTGGCCACGGACCAGTCG CGCGGCCTGAGCCTGTTCGCCAACGCCACGGTGCACGACAAGAAGACCAATGCCATCGACAACTATGTTCAGGCAGGTGT GGTTTACAAAGGGCCGTTCGATGCCCGCGCCAAGGACGACATCGGTTTCGCCCTGGCCCGCGTGCACGTCAACCCCGGCT ACCGCAAGAACGCCCGCCTCATCAACCAGGCCAACGGCCTGGACGACTACGACAACCCCGGCTTCCTGCCCGTGCAGGAC ACCGAGTACAGCGCCGAACTCTACTACGGCATCCACCTGGCCGACTGGCTCACGGTGCGCCCGAACCTGCAGTACATCCG CCACCCGGGCGGCGTGTCGCACGTCGACGACGCGCTGATCGGTGGTTTGAAGATCCAGAGCACGTTCTAA
Upstream 100 bases:
>100_bases GAATCGCTTCACTGCATATCCTTCGCAGCCAATTCCCCTCGAAGACCCGCGCTTCGTTGCGCTTGCCGTTTCTTCAACAA TCAAAAGATAGCGCTATCTC
Downstream 100 bases:
>100_bases CCCGACCCTTCCACACTACGGAGAACATACGATGAGCACTGACGGTGCCAAGAATGGAACCCGCTGGCTACCGCGCCTGA TGGGCGTGCTGCTGTTGCTG
Product: porin B precursor (outer membrane protein D1) (glucose porin)
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>449_residues MFQLPKTRYSGLALATLLGSLSSPTTSASEMFAKDSPWMLGDWGGTRSELLEKGYDFTLGYTGEMGSNLHGGYSHDRAAR YSDQFTFGVNMDLQKILGWQDTEFQLTVTERHGDNISNDRINDPRVGGFTSAQEVWGRGETWRLTQMWIKQKYFDGALDV KFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVRYNLNDELYAQVGVFEQNPSNLESNNGFKLSG SGTQGAVMPIELVWSPRVNGLKGEYRAGYYYSNAKAQDVLKDSHGTPAAISGAAYRSSSSKHGLWLGAQQQVTSLATDQS RGLSLFANATVHDKKTNAIDNYVQAGVVYKGPFDARAKDDIGFALARVHVNPGYRKNARLINQANGLDDYDNPGFLPVQD TEYSAELYYGIHLADWLTVRPNLQYIRHPGGVSHVDDALIGGLKIQSTF
Sequences:
NA
Specific function: NA
COG id: COG3659
COG function: function code M; Carbohydrate-selective porin
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA